Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0874 ATGGTGACAAGAGAAGATTTATACAACGTGATGTGTGCAATGGTACCTCTATATTTTGCAATGTTAGTTGCTTATGGTTCAGTAAAGTGTTGCAAAATGTTCACCCCAGATCAATGTTCCGGCATAAACCGATTCGTCGCAGTTTTTGCTGTTCCAGTTCTATCTTTTCACTTCATTTCTCTCAACAATCCTTATCAAATGGACACAAAATTTATCTTGGCAGATACAATTTCTAAGCTACTTGTTCTATTTTTTCTTACCATTTGGGCCATTTTCTTTACTAAAGGCTCATTGGATTGGGTTATAACTTTATTCTCAGTGGCTACTTTGCCTAATACCCTTGTTATGGGTATCCCTCTTCTTCAAGCTATGTATGGTGATTTTACACAAAGTCTCATGGTGCAACTAGTTGTTCTTCAATGTATTATATGGTATACTCTGCTTCTATTCCTACTAGAATACAGAGCAGCCAAACTCTTAATCAAAAGCCAGTTTCCAGGAACAACAGCAGCCTCCATAACAAAAATCTCCCTCGACGACGACGTAATTTCCCTCTACAGCCACGACGCACCGCTCACAACGCAATCAGAAACCGACGAAAATGGCAGAATCAAAGTCCGAATCCGACGCTCCATTTCCTCAGCACCACCAGAATCAACTTCCTCATTGGGTAAAAGCTTTACTCCTACAAGACTCTCCAATCTCTCCAACGCCGACATCTTCTCCATCAACACGCCGGGGAATTTTCTCGATAATATGACAAGTCCACAGCTGTCTGGTTATGCTTCAACGGACGCTTATTCCTTGCAGCCGACGCCTAGGGCGTCGAATTTTAATGAAATGGAGATAGTTGGCGGTGGTACGCCTGTTTGGGGGAGGTCTCCGGTGGCCGGAGGTAGGGTTTTGGATGGAGGGATGGTAGTGTGGGAATCACCTGAGAAATGGCGGGGAGATGGGGGACATGGATGCAAGGACATTACTATGTCAGATAAAGAAATTAGCTTCAGAGACAGCCTCAAAGTCTCAGTGGCAGGGGAAGTTGTGGACCCCAAAGACCAAATTGCCAGTAGCCCGAAAATGCCATATGCCTTTGTAATGTTAAGGCTTATACTTATTGTAGCTGGAAGAAAACTTTCTAGAAATCCTAACACATATTCTAGTCTATTAGGACTTCTATGGTCTCTAATCTCCTTCAAATGGAATATAGAAATGCCCAGTTTGATCAAATCATCTATCAAGATCATATCTGATGCAGGTCTTGGGATGGCAATGTTTAGCTTAGGGCTTTTCATGGCTCTTCAGCCTCGTATCATTGCTTGTGGCACCAAAAGAGCAGCCATGGGAATGGCCATTAGATTTCTATTTGGGCCTCTTGTAATGTCCTTATCCTCGATTGCCGTTGGATTGAGAGGGAAAAAATTGCATACTGCAATTGTACAGGCTGCTCTTCCACAAGGAATAGTTCCATTTGTATTTGCAAGAGAATATGGGCTGCATCCTGATATTTTGAGCACAGGGGTAATCTTTGGCATGTTAATTTCCTTGCCAATAACTCTCATTTACTACATATTTCTTGGCTTGTGA 1584 0.4249 MVTREDLYNVMCAMVPLYFAMLVAYGSVKCCKMFTPDQCSGINRFVAVFAVPVLSFHFISLNNPYQMDTKFILADTISKLLVLFFLTIWAIFFTKGSLDWVITLFSVATLPNTLVMGIPLLQAMYGDFTQSLMVQLVVLQCIIWYTLLLFLLEYRAAKLLIKSQFPGTTAASITKISLDDDVISLYSHDAPLTTQSETDENGRIKVRIRRSISSAPPESTSSLGKSFTPTRLSNLSNADIFSINTPGNFLDNMTSPQLSGYASTDAYSLQPTPRASNFNEMEIVGGGTPVWGRSPVAGGRVLDGGMVVWESPEKWRGDGGHGCKDITMSDKEISFRDSLKVSVAGEVVDPKDQIASSPKMPYAFVMLRLILIVAGRKLSRNPNTYSSLLGLLWSLISFKWNIEMPSLIKSSIKIISDAGLGMAMFSLGLFMALQPRIIACGTKRAAMGMAIRFLFGPLVMSLSSIAVGLRGKKLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLISLPITLIYYIFLGL* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0874 527 Pfam Membrane transport protein 10 522 IPR004776 GO:0016021|GO:0055085
Mtr1g0874 527 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 527 - -
Mtr1g0874 527 TIGRFAM 2a69: auxin efflux carrier 1 527 IPR014024 -
Mtr1g0874 527 PANTHER AUXIN EFFLUX CARRIER COMPONENT 6 1 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0874 Mtr-Chr1 10028130 10037856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0874 1 505 Organic Solute Cotransporters AT1G77110 62.612 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0874 K13947 - gmx:100800139 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0874 1 10028130 10037856 Mtr1g0874 1 10028130 10037856 ECH