Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0873 ATGCATATTCAATTTCAAACTTGTCACTCAATTAAGACACTTCCATTAACATGGAACATTCCAGAATCCATTAACCACCGACCACATCGCCACCTATTACCACCACCAAAATCCACCGTCACCACCACACTACCACCACTAAAAACCTCCAAAACCCACTCAATGCCACCAGAAAAGCTAGAAATTTTCAAATCACTAGAAAACTGGGCTTCTGAGTCTGTTTTACCACTACTAAAGCCTGTGGAACAATGCTGGCAGCCACAGAGTTTTCTCCCTGATCCTTCATTGCCATTTGATGAATTTACTGATCAGGTGAAGGTCCTTCGTGATCGCACGAAGGACCTTCCTGATGAGTATTTTGTTGTGTTGGTTGGTGATATGGTGACGGAAGATGCACTACCGACGTATCAGAGCATGATTAATGGTCTTGATGGTGTTGGTGATGAGATTGGTGCTAGTCCAAGCCCGTGGGCCGTTTGGACACGGGCTTGGACTGCTGAAGAAAATAGGCATGGAGATTTGCTTAGGACTTATTTGTATCTTTCTGGTAGGGTTGATATGGAGATGATTGAGAAAACTGTTCAGTATCTCATTGGAGCTGGCATGGACCCCGGGACAGAAAACAACCCATACTTGGGGTTCGTATACACATCATTCCAAGAACGAGCAACATTTGTATCACACGGAAACACAGCTCGCTTAGCGAAAGAAGGCGGTGATCCAGTGCTTGCGCGCATATGTGGTACCATCGCAGCTGATGAAAAGCGTCACGAGAACGCATACTCAAAAATCGTCGAGAAGCTTCTAGAAGTGGACCCCACAGGAGCAATGCTAGCCATTGGTGATATGATGGAGAAAAAAATCACAATGCCGGCACACCTTATGTATGATGGACAAGACCCCAAGCTATTCGAGCACTTCGCAGCCGTGGCACAACGCACCGGAGTTTACACGGCCAATGATTACGCTGATATCTTGGAGTTTTTAATCGAACGGTGGAGATTGGAGAAGCTTGAAGGATTAACGGGTGAGGGAAAAAGGGCGCAGGATTTTGTGTGTGGGTTAGCACCTAGGATTAGAAGGTTGCAAGAGAGGGCTGATGCACGTGCTCGTAAGATGAAACCACATGGGGTTAAGTTTAGTTGGATTTTTAATAATGAGGTTGTTTTGTGA 1173 0.4561 MHIQFQTCHSIKTLPLTWNIPESINHRPHRHLLPPPKSTVTTTLPPLKTSKTHSMPPEKLEIFKSLENWASESVLPLLKPVEQCWQPQSFLPDPSLPFDEFTDQVKVLRDRTKDLPDEYFVVLVGDMVTEDALPTYQSMINGLDGVGDEIGASPSPWAVWTRAWTAEENRHGDLLRTYLYLSGRVDMEMIEKTVQYLIGAGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHENAYSKIVEKLLEVDPTGAMLAIGDMMEKKITMPAHLMYDGQDPKLFEHFAAVAQRTGVYTANDYADILEFLIERWRLEKLEGLTGEGKRAQDFVCGLAPRIRRLQERADARARKMKPHGVKFSWIFNNEVVL* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0873 390 Gene3D Ribonucleotide Reductase, subunit A 45 390 IPR012348 GO:0016491
Mtr1g0873 390 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 41 389 - -
Mtr1g0873 390 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 41 389 IPR005067 GO:0006631|GO:0045300
Mtr1g0873 390 PIRSF Dlt9_acylACP_des 22 390 IPR005067 GO:0006631|GO:0045300
Mtr1g0873 390 SUPERFAMILY Ferritin-like 48 389 IPR009078 -
Mtr1g0873 390 MobiDBLite consensus disorder prediction 36 50 - -
Mtr1g0873 390 MobiDBLite consensus disorder prediction 27 54 - -
Mtr1g0873 390 Pfam Fatty acid desaturase 58 384 IPR005067 GO:0006631|GO:0045300
Mtr1g0873 390 CDD Acyl_ACP_Desat 58 366 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0873 Mtr-Chr1 10017433 10019870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0873 45 388 Acyl Lipid Metabolism Gene Families AT1G43800 80.058 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0873 K03921 - gmx:100037478 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0873 1 10017433 10019870 Mtr1g0873 1 10017433 10019870 ECH