Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0871 ATGAGGGGTCCCACCCCAAACACCGTTGAGCCACGTCACCGATTATCAACTTCTTCATTCAGTGAAGATACTACCAAGAGAAGGTCTCAAAAAAATAAGGATTTTAAAGATGTTGAGAAAGCATCACATATTCCGTTCCAAGATAGGAGTATAAATTGCAAGCCGAATTGGAAAATTATTTTGGTTATTATTGTCTTGGGAACCTTGCTTACAATTTTCCATCCTCCAGCTGTTTATAATACTGATCATATATCAAACTCTATATCACGGCCTACATTTGTAAACGACCGGAATGGGGAGCTCGATGGAACTGATCCGCGTTATGCATCATTTCTAAATATTGACTGGAACCAAATAACTAATGTTCTGGAAAATTTGAAGGATAAGGACACATATCAGGGTGTTGGCTTATTAAACTTCAATGACAGTGAGATTGACCACTGGAAGCAACTAGTACCAGAAGCCGAGCATGTAATCCTTCGCCTGAACTATGCTTCAAGTAACATCACGTGGGAAGACTTGTATCCAGAATGGATCGATGAAGAAGAAGAGTATGAGTTTCCTACTTGTCCAACACTACCTAGGATTCAGGCACCAGGAAAACCACGGCTTGATCTTATTGCTGTTAAGCTTCCCTGCGATAAGTCAGGGCGCTGGTCAAGAGACGTAGCTCGTTTGCACCTGCAGATTGAAGCAGCAAGACTTGCTGCCACTTCCAAAGGGTTTCATCCAGTGCGTGTTTTTTTTGTGACCGATTGTTTCCCAATTCCAAATCTCTTTACTTGCAAGGATGTTATACAGCGTGAAGGGAATGTCTGGCTTTATGAACCTGACCTGCATAAACTCAGAGAGAAGCTGCAGTTACCAATTGGCTCATGTGAACTATCAGTTCCTTTGAAGGCTAAAGAAAATTTTCACTCGGAAAGGGCACACCGAGAAGCTTATGCAACAATCCTGCACTCTGCACATATTTACGTTTGTGGAGCCATCACTGCAGCTCAAAGTATTCGAATGTCTGGTTCAACACGTGATCTTGTGATTCTGGTTGATGAAACAATAAGTGATTATCACAGGAGTGGCTTGGCAGCAGCTGGATGGAAGATCCATACAATTCAAAGAATCAGGAATCCAAAGGCAGAACCAGAGGCATATAACGAGTGGAACTACAGCAAATTTCGTCTCTGGCAGTTAACAGATTACGACAAAATCATTTTCATCGACGCCGACCTTCTTATACTCAGAAATATCGATTTTCTTTTTGAGATGCCTGAAATATCAGCCATAGGAAACAATGCTACACTGTTCAACTCAGGTGTAATGGTGGTTGAGCCATCGAATTGCACATTTCAACTACTTATGGATCACATTAATGAGATTGTATCCTACAATGGTGGGGACCAGGGTTATCTAAATGAAATTTTCACATGGTGGCATCGGATTCCAAAACACATGAACTTCTTGAAACATTTCTGGGAAGGCGACGAGGATCAGAAAAAGGCGATGAAAACTCGTCTCTTTGGAGCTGATCCACCAATCCTTTATGTCATCCACTATCTAGGTACTAAACCATGGCTTTGTTTCCGAGATTACGACTGCAACTGGAACGTGGACATTCTGCAGGAGTTTGCGAGCAATGTAGCTCATGCGAGGTGGTGGAAGGTTCACGACGCCATGCCAGAAAACTTGCAGAAGTTCTGTTTGCTTAGGTCGAAGCAGAAGGCAGCGTTAGAGTGGGATCGTAGACAGGCCAAGAAAGGAAACTACAGCAATGGTCACTGGAAAATTAAGATAAAAGACCCGCGTTTGAAAACGTGCTTTGAGGATTTTTGTTTCTGGGAGAGTATGTTATGGCATTGGGGTGACAAGAATTGGACAGATAATTCTACTGTTAACAATTTGCCACCTGCTGCTGTCAAAACTAAATCTCTATCTTCTTTATGA 1941 0.4219 MRGPTPNTVEPRHRLSTSSFSEDTTKRRSQKNKDFKDVEKASHIPFQDRSINCKPNWKIILVIIVLGTLLTIFHPPAVYNTDHISNSISRPTFVNDRNGELDGTDPRYASFLNIDWNQITNVLENLKDKDTYQGVGLLNFNDSEIDHWKQLVPEAEHVILRLNYASSNITWEDLYPEWIDEEEEYEFPTCPTLPRIQAPGKPRLDLIAVKLPCDKSGRWSRDVARLHLQIEAARLAATSKGFHPVRVFFVTDCFPIPNLFTCKDVIQREGNVWLYEPDLHKLREKLQLPIGSCELSVPLKAKENFHSERAHREAYATILHSAHIYVCGAITAAQSIRMSGSTRDLVILVDETISDYHRSGLAAAGWKIHTIQRIRNPKAEPEAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMPEISAIGNNATLFNSGVMVVEPSNCTFQLLMDHINEIVSYNGGDQGYLNEIFTWWHRIPKHMNFLKHFWEGDEDQKKAMKTRLFGADPPILYVIHYLGTKPWLCFRDYDCNWNVDILQEFASNVAHARWWKVHDAMPENLQKFCLLRSKQKAALEWDRRQAKKGNYSNGHWKIKIKDPRLKTCFEDFCFWESMLWHWGDKNWTDNSTVNNLPPAAVKTKSLSSL* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0871 646 MobiDBLite consensus disorder prediction 16 37 - -
Mtr1g0871 646 PANTHER GLYCOGENIN SUBFAMILY MEMBER 15 627 - -
Mtr1g0871 646 MobiDBLite consensus disorder prediction 1 37 - -
Mtr1g0871 646 CDD GT8_Glycogenin 313 558 - -
Mtr1g0871 646 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED 15 627 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Mtr1g0871 646 Pfam Glycosyl transferase family 8 319 525 IPR002495 GO:0016757
Mtr1g0871 646 SUPERFAMILY Nucleotide-diphospho-sugar transferases 313 563 IPR029044 -
Mtr1g0871 646 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 310 561 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0871 Mtr-Chr1 10005915 10012379 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0871 4 621 Glycosyltransferase AT1G77130 68.269 0.0 881
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0871 K20890 - gmx:100787339 1196.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0871 1 10005915 10012379 Mtr1g0871 1 10005915 10012379 ECH