Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0809 ATGTTGTTGATGAGAGTGATATTGGTACTGTTGTTACCGTTTATGCTTCTACTCCAACAAGGTAACAGCAGCACTACAACAAATGCTTGTCCACCTTCTTCTTGTGGCAAAATTTCCAACATAAGTTACCCATTTCGATTACAAGATGACCCCAAACACTGCGGAGAAAGCAGGTACGAACTATCTTGTGAAAATAATGTGGCAACTTTATATTTGTATTCGGGAAAATATTATGTGCAATCCATCAACTACAACAATTTCACAATCCGAGTTGCTGATCCTGGAGTCATAGAATATAATTTCAATTTACTTCCACATTATTCATTGTCTCGATCTAATTTCTGTGATACCTATAATAACGACGAAAATTGTACGGATCCATACCATGCCGGTTACAGGGGCCAACTCTACAGTTCTGAAAACAAGCTTTTCGAGCACATTGTTTACCTTAACTGTAGCCATCCAGTACGTAACAATCCTAAATATGTGAATACTTCTTCCTGTCTCACTCAGGAGTCCAAATCAAAAGGCTATTATATTTATGCTATAGCTGGTCATATAACTGCTGAAGATTTACAAGTTGGTTGTCATGTGAAATTTATTACTCCCACTTCTTTGAAGGGTTTGCAAGGAAATCAAGTAATATCATATGATGAAATACAAAAGGCATTAGTGTATGGATTTGAGATTTCATGGTTGCGTCTTCCTTGTCAGAATTATTGTGAAAAGTCCGAGCTCTGTTACTTCGACACTACCACACAGAAACTTGGATGCAATGTGCACTATTGCTTCACTCTTATGGGATTTTCAGAGAGTAATAATTGTGGGAAATGGTCTCGGATTGTTTTATCAGCTAAAGATATCATCAAAGTTTTCTGGAATGGGCTTAAGCAAAAAGAGAAACAATTTTACAGGGGTGGTGAGTTTCTTTAA 933 0.3698 MLLMRVILVLLLPFMLLLQQGNSSTTTNACPPSSCGKISNISYPFRLQDDPKHCGESRYELSCENNVATLYLYSGKYYVQSINYNNFTIRVADPGVIEYNFNLLPHYSLSRSNFCDTYNNDENCTDPYHAGYRGQLYSSENKLFEHIVYLNCSHPVRNNPKYVNTSSCLTQESKSKGYYIYAIAGHITAEDLQVGCHVKFITPTSLKGLQGNQVISYDEIQKALVYGFEISWLRLPCQNYCEKSELCYFDTTTQKLGCNVHYCFTLMGFSESNNCGKWSRIVLSAKDIIKVFWNGLKQKEKQFYRGGEFL* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0809 310 Pfam Wall-associated receptor kinase galacturonan-binding 30 93 IPR025287 GO:0030247
Mtr1g0809 310 PANTHER OS01G0113900 PROTEIN 3 242 - -
Mtr1g0809 310 PANTHER OS01G0690200 PROTEIN 3 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0809 Mtr-Chr1 9141588 9165626 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0809 30 263 Receptor kinase-like Gene Family AT5G38260 24.481 2.00e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0809 - - mtr:MTR_1g027380 572.392