Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0786 ATGGCATGCATCAGATTGATTCCACATTCACAAAACCTAAATTCATTAGTATCACACCATCATCATCATCATGTTTCCTATCCTCAACAACATCACTTCATCAATTTCCATCGCCACGTCACAAAAATCAATGCTCTCAATAATAATTCCAATAAACCTGATGGTGTTCCTCTTTTATCTTGCTCCGAGGCCTATGAAAGGATGAAAATATTCAGAGAAAAGATAAAGGGAAAGCAGCAATACCTTGCTATGTACTCTAGTATTTTTGGTGGGATAACAATTGATCCAGAAGCTATGGTTATTCCTATGGATGACCACATGGTCCATAGAGGCCATGGTGTCTTTGATACTGCAGCAATAATGGACGGATATCTGTACGAGCTAGATCAACACCTTGATCGCTTTCTAAATTCAGCATCAAGGTCTAAAATAGACCCACCATTTGATCGTGAAAGTATACGAAAAATTCTCATACAAACTGTGAGTGCTTCCAAATGTAGAAAAGGAGCACTAAGATATTGGTTATCAGCAGGACCTGGTGATTTTCAGCTCTCTCCCTCCGGCTGCCACCAGTCAGCACTTTATGCAATTGTAATACAGGATATGTCACCGGCCGTGGCATCAGTTAAGTCCAGAGGAGTTAAAGTCATTACTTCGTCTATTCCAATAAAACATCCCAAGTTTGCAATCACTAAGAGTGTGAATTACCTTCCAAATGTGTTATCAAAGATGGAGGCAGAAGAAGCCGGTGCTTTTGCTGGCATTTGGCTCGACGATGAAGGTTTTGTTGCTGAAGGACCGAATATGAATGTGGCTTTTGTCACTAAAGAGAAGGAACTTATAATGCCTTACTTTGACAAAATTCTAAGCGGATGTACCGCTAAGAGAGTTTTCACCCTTGCCGAGGGTTTATTGAAGCAGGGTAAACTTCAGGGGATAAAAATGAAAAATGTAACTGTGGAAGAAGGGAAGAAAGCAGATGAAATGATGCTTCTTGGAAGTGGAGTTCTTGTTTGCCCTATAGTGCAGTGGGATGAACAGGTTATTGGAGACGGCAAAGAAGGGCCGATAACACATGCTCTCTCAAATCTGATTGTCGAGGACATGAAATCAAGCCCCCCTACTGTTCGTACACCTGTTCCATATTGA 1149 0.4108 MACIRLIPHSQNLNSLVSHHHHHHVSYPQQHHFINFHRHVTKINALNNNSNKPDGVPLLSCSEAYERMKIFREKIKGKQQYLAMYSSIFGGITIDPEAMVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHLDRFLNSASRSKIDPPFDRESIRKILIQTVSASKCRKGALRYWLSAGPGDFQLSPSGCHQSALYAIVIQDMSPAVASVKSRGVKVITSSIPIKHPKFAITKSVNYLPNVLSKMEAEEAGAFAGIWLDDEGFVAEGPNMNVAFVTKEKELIMPYFDKILSGCTAKRVFTLAEGLLKQGKLQGIKMKNVTVEEGKKADEMMLLGSGVLVCPIVQWDEQVIGDGKEGPITHALSNLIVEDMKSSPPTVRTPVPY* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0786 382 Gene3D - 61 200 IPR043131 -
Mtr1g0786 382 CDD PLPDE_IV 105 365 - -
Mtr1g0786 382 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 56 381 - -
Mtr1g0786 382 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 89 371 IPR036038 GO:0003824
Mtr1g0786 382 Pfam Amino-transferase class IV 113 343 IPR001544 GO:0003824
Mtr1g0786 382 Gene3D - 206 375 IPR043132 -
Mtr1g0786 382 PANTHER AMINO-ACID AMINOTRANSFERASE 56 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0786 Mtr-Chr1 8885307 8888295 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0786 K18482 - gmx:100794026 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0786 1 8885307 8888295 Mtr1g0786 1 8885307 8888295 ECH