Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0784 ATGGTGAATTCTATGGTTGAACGCGCCACGAGCGATATGCTCATCGGTCCCGATTGGGCTATGAATATCGAGATCTGTGACATGCTCAATCATGACCCTGGGCAAGCAAAGGATGTTGTCAAAGGTATAAAGAAGCGGATTGGAAGTAGAAATTCTAAAGTTCAACTCCTTGCTCTAACCTTGCTGGAAACAATCATAAAGAACTGTGGAGATATTGTTCACATGCATGTTGCAGAGAGAGACGTGCTTCATGAGATGGTGAAAATAGTAAAGAAAAAGCCTGATTTTCATGTCAAAGAGAAGATACTGCTTCTTGTAGATACTTGGCAAGAAGCTTTTGGGGGACCGAGGGCAAGATATCCACAATACTATGCTGCATACCAGGAACTGCTGCGTGCCGGGGCAGTATTCCCTCAGAGATCTGAACAATCTGCACCTGTATTCACTCCTCCACAAACACAACCATTGACTTCATACCCACCAAACATACGTGACGCGGATGCTCGGCCAGACGCAGCTGAGGCCTCTGCAGAATCTGAATTTCCAACGCTAAGTTTGACTGAAATACAGAATGCACATGGTATTATGGATGTTCTTGCGGAAATGCTGAATGCAATAGACCCTAACAACAAAGAAGGGCTTAGACAGGAGGTTATTGTTGATTTGGTGGAGCAGTGTAGAACATACAAGCAAAGAGTGGTACACCTTGTAAATTCAACTACGGATGAATCACTGCTATGCCAGGGACTAGCTCTCAATGATGATCTGCAGCGTCTACTTGCCAGACATGAATCTATTTTGTCAGGAACTTCTACTCAAAATGGAAATCAGATTGAGGATTCAAAGCCTGCATCTGCTCGGCAACTTGTAGATATTGATGCTCCTTTGGTTGATACTGGAGATACTGGCAAACAAACTGATGGGAGGTCCTCTTCTGGTGCTGAAGCAGGGTCCCAAACATTGAATCAATTAATGCTTCCTGCACCAGCTACATCCAATGGTTCAGCTGTACCTGCCAAAGCTGATCCCAAGTGGGACCTGCTCAGTGGTGATAACTATGACTCACCAAAAGCAGATACTTCACTTGCTCTTGTTCCTCTAGGAGAACAACAACCTGCCACTCCTGTATCTAATCAGAATGCCCTTGTTCTTTTTGATATGCTTTCTAGTGGAGACAATGCACCTACGTCTGCCAATACCCAGCCAACCCAACAACCTAATGTTGGTGGCCAATCTGGTCCATTTACTCCCCAATATCAACAACAGCAGCAGACATTCACATCTCAAGGTGGATTTTACCCCAATGGGAATGTGCTAAATGCTGGTTTACCTCAGTATGAGCAATCACTGCATACACAAAGTACAGCTCCTGCCTGGAATGGTCAGGTTGCAGAACAGCAACAGCCAGCTTCCCCTTACGGTGCGCAAAATAGTGGATCATTGCCACCACCTCCCTGGGAAGCTCAACCGGCCGACAATGGAAGTCCGGTAGCAGGTGGTCAGTATCCACTACCACCTCAGTATCCACAACCACCTCAATTCAGTCATGTACAGAGTTCCACAAATCATCAGGGGCCTCAAGCAATGGGTTATGGCCAGGCTGGTGGTATGTATATGCAGCCAAATGCTAACGGCCATATGTCAGCAGTCAATAACCAGGTTGGAAGCAATCAATTGGGCATGCACCCTCAGCATATGCAAGGTGTTGCAGGGCACTACATGGGCATGGCTTCACATCAAGCACAAGGTGGTCCTGCGGCTTCCATGTATCCACAACAGATGTATGGAAACCAATTTGCAGGTTATGGCTACGGTCAACAACAACAGGGAGTTCCATACATTGAGCAGCAAATGTATGGCATGTCTGTCAGAGATGATAGTTATTTGCGAAACTCCAATCAGGGTTATACATCTTATGTTCCATCGGGGAAGCCTTCCAAGCCAGAGGATAAGTTATTCGGGGATCTTGTGGACATGGCAAAAGTGAAGCCGAAAACAACTCCAGGTCGAGCTGGTAGCATGTAA 2025 0.4612 MVNSMVERATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAERDVLHEMVKIVKKKPDFHVKEKILLLVDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPQRSEQSAPVFTPPQTQPLTSYPPNIRDADARPDAAEASAESEFPTLSLTEIQNAHGIMDVLAEMLNAIDPNNKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTTDESLLCQGLALNDDLQRLLARHESILSGTSTQNGNQIEDSKPASARQLVDIDAPLVDTGDTGKQTDGRSSSGAEAGSQTLNQLMLPAPATSNGSAVPAKADPKWDLLSGDNYDSPKADTSLALVPLGEQQPATPVSNQNALVLFDMLSSGDNAPTSANTQPTQQPNVGGQSGPFTPQYQQQQQTFTSQGGFYPNGNVLNAGLPQYEQSLHTQSTAPAWNGQVAEQQQPASPYGAQNSGSLPPPPWEAQPADNGSPVAGGQYPLPPQYPQPPQFSHVQSSTNHQGPQAMGYGQAGGMYMQPNANGHMSAVNNQVGSNQLGMHPQHMQGVAGHYMGMASHQAQGGPAASMYPQQMYGNQFAGYGYGQQQQGVPYIEQQMYGMSVRDDSYLRNSNQGYTSYVPSGKPSKPEDKLFGDLVDMAKVKPKTTPGRAGSM* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0784 674 MobiDBLite consensus disorder prediction 303 317 - -
Mtr1g0784 674 MobiDBLite consensus disorder prediction 461 526 - -
Mtr1g0784 674 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Mtr1g0784 674 CDD VHS 2 132 - -
Mtr1g0784 674 Pfam GAT domain 196 269 IPR004152 GO:0035091|GO:0043130
Mtr1g0784 674 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Mtr1g0784 674 CDD GAT_GGA_like_plant 188 266 - -
Mtr1g0784 674 Pfam VHS domain 3 129 IPR002014 GO:0035091|GO:0043130
Mtr1g0784 674 SUPERFAMILY GAT-like domain 141 269 - -
Mtr1g0784 674 MobiDBLite consensus disorder prediction 461 477 - -
Mtr1g0784 674 MobiDBLite consensus disorder prediction 392 440 - -
Mtr1g0784 674 MobiDBLite consensus disorder prediction 294 317 - -
Mtr1g0784 674 Gene3D - 1 135 IPR008942 -
Mtr1g0784 674 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Mtr1g0784 674 Gene3D - 183 275 IPR038425 -
Mtr1g0784 674 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Mtr1g0784 674 PANTHER TARGET OF MYB PROTEIN 1 1 668 - -
Mtr1g0784 674 PANTHER TOM1-LIKE PROTEIN 1 668 IPR044836 GO:0035091|GO:0043130|GO:0043328
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0784 Mtr-Chr1 8869558 8880096 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0784 - - gmx:100809022 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0784 1 8869558 8880096 Mtr1g0784 1 8869558 8880096 ECH