Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0770 ATGCACTTGAGCGAGAATGAAGGAATTGAGGGGAAGAGCTTCGTAGTGACCGGTGGACTTGGATTCGTAGGATCTGCTCTCTGCTTGGAACTCATTAGAAGAGGTGCTCAACAGGTTCGTGCCTTTGACCTCCGCCAATCTTCTCCTTGGTCTCATCTTCTTAAACTCAAGGGAGTCAACTGCATACAAGGGGATGTTACCCGCAAAGAGGATGTTGAAAGGGTACTCCGTGGTGCTGACTGCGTATTCCACCTTGCTGCCTTTGGGATGTCAGGAAAAGAGATGCTGCAATTTGGTCGAGTTGATGAAGTCAATATAAACGGGACATGCCATATACTCGATGCTTGCATTGACCTTGGTATCAAAAGGCTTGTTTATTGTAGCACATACAATGTTGTCTTTGGTGGTCAAAAGATACTTAACGGAAATGAGGCTTTGCCGTATTTCCCAATTGATCGTCACGTTGATCCATACAGCCGCAGTAAATCAATTGCTGAACAGTTGGTTCTAAAGAATAATGCCCGCACTCTCAAAAATGACACCAGGAATCATCTATACACTTGTGCTGTTCGTCCAGCTGCAATCTATGGACCGGGGGAAGACAGGCACCTTCCAAGGATCATAACCATGGCAAGGTTAGGTCTGCTTCTGTTCAGAATTGGTGACAAAACTGTAAAGTCAGATTGGGTTTTTGTTGATAACCTTGTCCTTGCTCTTATAATGGCAAGTATGGGACTTTTGGATGACAACAATGACAAGGGAAAACGACCTATAGCTGCTGGCCAGGCATACTTTATATGTGACGGTTCACCTGTCAATTCTTTTGAATTCCTCCAACCTCTACTCAGGAGTTTGGATTATGATCTACCAAAAAGATCTTTAGCTCTCGAACATGCTCTTGTTCTTGCGAAGATTTGCCAGGGTGTTTATACAATCTTATATCCACTGCTTAATCGGTGGTGGCTCCCTCAACCATTCATCCTCCTTCCGAGTGAAGCACTCAAGGTGGGAGTGACTCACTATTTCTCTTACCTTAAAGCCAAAGAGGAGCTTGGCTATGTTCCCATGGTGACCTCGCGAGAGGGGATGGATTCTACCATATCTTACTGGAAACAGAGGAAAAGGCAAATTCTGGATGGGCCTACCATCTATACTTGGCTATTTTGTGTCGTTGGAATGACCTCACTATTCTGTGCTGGTTTCCTACCAGACATGGGGATTATGTTTCTTCTCAGAGCTATATGTCTATTCGTCTTTCGATCAATGTGGATGACAAGGCTGGTATTCATTATAGCGACAGCTGTGCACTTCATTGAGGCCATTTATGCTTGGTACCTGGCTAAAAGGGTGGATCCTGTCAATGCAAGAGGCTGGTTTTGGCAAACATTTGCTCTGGGATTCTTTTCATTGTGTTTTCTGTTGAAAAGAGCAAGGGAATAA 1440 0.4437 MHLSENEGIEGKSFVVTGGLGFVGSALCLELIRRGAQQVRAFDLRQSSPWSHLLKLKGVNCIQGDVTRKEDVERVLRGADCVFHLAAFGMSGKEMLQFGRVDEVNINGTCHILDACIDLGIKRLVYCSTYNVVFGGQKILNGNEALPYFPIDRHVDPYSRSKSIAEQLVLKNNARTLKNDTRNHLYTCAVRPAAIYGPGEDRHLPRIITMARLGLLLFRIGDKTVKSDWVFVDNLVLALIMASMGLLDDNNDKGKRPIAAGQAYFICDGSPVNSFEFLQPLLRSLDYDLPKRSLALEHALVLAKICQGVYTILYPLLNRWWLPQPFILLPSEALKVGVTHYFSYLKAKEELGYVPMVTSREGMDSTISYWKQRKRQILDGPTIYTWLFCVVGMTSLFCAGFLPDMGIMFLLRAICLFVFRSMWMTRLVFIIATAVHFIEAIYAWYLAKRVDPVNARGWFWQTFALGFFSLCFLLKRARE* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0770 479 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 362 - -
Mtr1g0770 479 Gene3D - 4 376 - -
Mtr1g0770 479 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 378 IPR036291 -
Mtr1g0770 479 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 294 IPR002225 GO:0003854|GO:0006694|GO:0016616
Mtr1g0770 479 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 42E MEMBER 1 10 362 - -
Mtr1g0770 479 Pfam Transmembrane protein 254 388 474 IPR028110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0770 Mtr-Chr1 8671819 8675097 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0770 1 479 Lipid Metabolism Gene Families AT2G33630 67.850 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0770 - - gmx:100808827 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0770 1 8671819 8675097 Mtr1g0770 1 8671819 8675097 ECH