Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0732 ATGATAGCGAAAGACTTCAACGACGAAGAAAAATGGCTCGCAGAAGGAATCGCTTCTATTCAACACAACGCTTTCTTCATGCATCGCGCTCTTGATGATAACAATCTCAGAGATTCACTCAAATACTCAGCGCAGATGTTATCTGAACTTCGAACTTCTAGACTCTCTCCTCATAAATATTATGAACTGTATATGAGAGCTTTTGATGAGTTACGGAGGTTGGAGATGTTCTTTAAAGATGAAAGTAGACATGGTGTTTCGATTGTTGATTTGTATGAGCTTGTTCAACATGCCGGGAATATATTGCCTAGATTGTATCTTCTTTGCACGGTTGGATCCGTTTACCTTAGATGCAAGGATACTCCTGTAAGGGACGTTCTTAAAGACCTAGTGGAAATGTGTCGCGGTGTTCAGCATCCGATTCGTGGTCTGTTTTTGAGGAGTTATCTTTCTCAAGTCAGTAGAGACAAGTTGCCTGATATTGGCTCTGATTACGAGGATAGGGATTATGGCAGTGTAAAGGATGCAGTTGAATTTGTTCTAGAGAATTTCTCAGAAATGAATAAGCTCTGGGTTCGATTGCAACATCAGGGAGCCGGTCGGGTAAAAGAGAAGAAAGATAAAGAAAGGAACGAGCTTCGCGATCTTGTCGGGAAAAACCTCCACGTTCTGAGTCAGATAGATGGTGTAGACCTTGAGGTGTACAAAGACACCGTCCTTCCAAGTATTCTAGAGCAGGTTGTCAACTGTAAAGATGAGCTTGCCCAATTTTATCTCATGGAGTGCATAATCCAGGTTTTTCCAGATGAATACCACTTGCAGACACTTGAGACACTCTTAGGGGCTTGCCCCCAATTGCAGCCCACAGTAGACATCAAGACAGTGTTATCTCAGCTAATGGACAGGTTGTCCAATTATGCTGCCTCAAGTACTGAAGTATTACCTGAATTTTTGCAAGTGGAAGCATTTACCAAACTAAGCACTGCAATAAGCAGGGTGATCGAAGCACAGGTTGACATGCCTATTGTGGGTGCAATAGCTTTGCATGTCTCTCTTCTTACATTTACTCTTCGTGTTCATCCAGATCGACTTGATTATGTGGATCAAGTACTGGGATCATGTGTCAATAAGCTGTCTGGAAAACCAAAGCTTGATGACAATAGAGCCACAAAGCAAGTTGTTGCACTTTTAAGTGCCCCACTTGATAAATACAATGACGTTGTGACTGCACTGACACTTTCCAATTATCCTCGTGTTATGGATCATCTTGATAACGTGACAAATAAACTCATGGCTCTGGTTATTATCCAAAGCATTATGAAGAATAACACTTATATATCTACTGCCGATAAGGTTGAAGTTTTATTTGAATTAATAAAAGGGCTCATAATAGATTTGGACGGAACATCTGAGGATGAGATCGATGAAGAAGATTTCAGTGAGGAACAAAACTCTGTTGCCCGCCTCATAAACATGCTTCATAATAATGACCCAGAGGAAATGTTCAAGATAATATGTACAGTAAGGAAACATATTATGATTGGAGGACCAAGGCGCCTACCTTTCACTGTTCCTTCTCTTATATTTTCTGCACTGAAGTTGATCAGGCAATTGCAAGGCCAAGGTGGAGACATAGCAGGAGAAGAAGAACCTGCAACACCCAGAAAAATATTTCAGCTTTTAAACGAGACCATCGAAGTTCTATCTTCTGTATCATCTTCTGAACTGGCCCTGAGACTGTATCTGCACTGTGCTGAGGCTGCTAATGACTGTGACCTCGAGCCGGTTGCTTATGAATTTTTCACTCAGGCATTTGTATTATATGAAGAAGAAATTGCGGACTCTAAAGCCCAGGTAACTGCAATACATTTAATTATCGGGACTCTCCAGAGAATGAGCATCTTTGGCGTTGAGAACAGGGATACATTAACACACAAGGCCACAGGGTATTCTGCAAAACTTTTGAAGAAGCCTGATCAGTGTCGAGCTGTTTATGCATGCTCACATCTCTTTTGGGTTGATGATCAAGATGGTATTAAGGATGGAGAAAGGGTGTTGCTTTGCCTCAAGCGTGCTTTGAGGATCGCAAATGCTGCTCAGCAAATGGCCAATGTAGCCAGGGGTAGCAGTGGTCCAGTTACGCTTTTTGTTGAAATACTGAATAAGTACATTTACTATTTTGAGAAAGGAAATCCACAGATCACTAGTGCTGCTATCCAGGGGCTTATAGAATTAATCAAGACTGAGATGCAGAGTGACTCTGCATCAGCCCTTCCAGCTTCAGATCCTTTCTTTGCTAGCACACTGAGGTACATACAATTTCAAAAACAGAAGGGCGGTATACTGGGTGAAAAATACGATTCTATCAAGGTCTAA 2376 0.4158 MIAKDFNDEEKWLAEGIASIQHNAFFMHRALDDNNLRDSLKYSAQMLSELRTSRLSPHKYYELYMRAFDELRRLEMFFKDESRHGVSIVDLYELVQHAGNILPRLYLLCTVGSVYLRCKDTPVRDVLKDLVEMCRGVQHPIRGLFLRSYLSQVSRDKLPDIGSDYEDRDYGSVKDAVEFVLENFSEMNKLWVRLQHQGAGRVKEKKDKERNELRDLVGKNLHVLSQIDGVDLEVYKDTVLPSILEQVVNCKDELAQFYLMECIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSQLMDRLSNYAASSTEVLPEFLQVEAFTKLSTAISRVIEAQVDMPIVGAIALHVSLLTFTLRVHPDRLDYVDQVLGSCVNKLSGKPKLDDNRATKQVVALLSAPLDKYNDVVTALTLSNYPRVMDHLDNVTNKLMALVIIQSIMKNNTYISTADKVEVLFELIKGLIIDLDGTSEDEIDEEDFSEEQNSVARLINMLHNNDPEEMFKIICTVRKHIMIGGPRRLPFTVPSLIFSALKLIRQLQGQGGDIAGEEEPATPRKIFQLLNETIEVLSSVSSSELALRLYLHCAEAANDCDLEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMSIFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVARGSSGPVTLFVEILNKYIYYFEKGNPQITSAAIQGLIELIKTEMQSDSASALPASDPFFASTLRYIQFQKQKGGILGEKYDSIKV* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0732 791 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 2 791 - -
Mtr1g0732 791 PIRSF Retromer_Vps35 3 791 IPR005378 GO:0015031|GO:0030906|GO:0042147
Mtr1g0732 791 Pfam Vacuolar protein sorting-associated protein 35 12 748 IPR005378 GO:0015031|GO:0030906|GO:0042147
Mtr1g0732 791 SUPERFAMILY ARM repeat 469 747 IPR016024 -
Mtr1g0732 791 Gene3D - 467 776 IPR042491 -
Mtr1g0732 791 PANTHER VACUOLAR SORTING PROTEIN 35 2 791 IPR005378 GO:0015031|GO:0030906|GO:0042147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0732 Mtr-Chr1 8261687 8271601 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0732 K18468 - gmx:100775573 1395.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0732 1 8261687 8271601 Mtr1g0732 1 8261687 8271601 ECH