Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0635 ATGGGAACCCTAGGAAAAGCAATATACAGCGTTGGATTTTGGATTCGAGAAACTGGACAAGCCATTGATCGTCTCGGTTCTCGCCTCCAGGGGAATTACTACTTCCAAGAACAGCTGTCTAGGCATCGAACTTTGATGAACGTGTTTGATAAGGCTCCTGTTGTTGATAAAGATGCATTTATTGCCCCAAGTGCCTCTGTCATCGGTGATGTTCACATTGGTAGAGGATCATCCATTTGGTATGGATGTGTCATGAGAGGTGACGTGAACAACATCAGTGTTGGAAGTGGAACGAACATTCAGGATAACTCCTTGGTGCACGTTGCAAAGTCAAATTTAAGTGGGAAGGTGTTGCCTACTATTATTGGGGATAATGTTACTGTAGGTCATAGTGCGGTCTTACATGGTTGCACTGTTGAGGATGAGGCTTTTGTTGGTATGGGTGCAACACTACTGGATGGTGTTGTTGTTGAGAAACATGCCATGGTTGCTGCTGGTGCCCTTGTGAGACAGAATTCACGGATTCCATCCGGAGAGGTTTGGGCCGGCAATCCAGCAAAGTTCTTGAGGGAGCTCACTGCTGAAGAGATATTATTTATCTCCCAGTCAGCCATCAATTACAGTAACCTTGCACAGGTCCATGCAGCTGAAAATGCCAAGCCTTTTGATGAAATTGAGTTTGAGAAGGTGCTCCGAAAGAAGTTTGCGCGTAAAGACGAGGAGTATGACTCAATGCTGGGCGTTGTTCGTGAGATCCCTCCAGAGCTCATTCTTCCAGATAATGTCCTACCTAAACAAACAAAGGTTTCCACACAATGA 819 0.4542 MGTLGKAIYSVGFWIRETGQAIDRLGSRLQGNYYFQEQLSRHRTLMNVFDKAPVVDKDAFIAPSASVIGDVHIGRGSSIWYGCVMRGDVNNISVGSGTNIQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVEKHAMVAAGALVRQNSRIPSGEVWAGNPAKFLRELTAEEILFISQSAINYSNLAQVHAAENAKPFDEIEFEKVLRKKFARKDEEYDSMLGVVREIPPELILPDNVLPKQTKVSTQ* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0635 272 Gene3D Hexapeptide repeat proteins 43 222 - -
Mtr1g0635 272 CDD LbH_gamma_CA_like 54 212 - -
Mtr1g0635 272 PANTHER GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL 1 267 - -
Mtr1g0635 272 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Mtr1g0635 272 PANTHER DYNACTIN SUBUNIT P25 1 267 - -
Mtr1g0635 272 SUPERFAMILY Trimeric LpxA-like enzymes 47 212 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0635 Mtr-Chr1 7193031 7198299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0635 121 196 Miscellaneous Gene Families AT2G17640 34.118 7.69e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0635 K01726 - jre:108982315 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0635 1 7193031 7198299 Mtr1g0635 1 7193031 7198299 ECH