Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0617 ATGCCTTTCTCCACTACCATTCCAATCCCAACCTCTCATTGTTCTCGCCGTGGGCGTTATTTAAACCTCTCTTTGCATAATGAGAAATTCAAACCGTTTCATTTCGTTTCTTTCTCTCTCCGTAACCGTTTCTCTCCTTGTCATTGCTTTGCTTCTAGAATCTTCTCCGATGCTCACTCTCCGCCGCGCTTTCTCCCCTTTCCGCCGCCGCCGTCGTCTCACTCCGCCTCCTCAGGAGATGGCCGGTTGAATGCTAAATTTTCAAGGGATGACATCCGTATTGAGGCACGTGATGAAAGTTCTGGAGGCGATAGTGCCAAGCAGCTGCGTGAATGGCTATCATCTCCTGATTATGGACCTAACACTGATATAGGAAAGCGGATCTTCTGTAATCGACCACTGAATATGAAGAATATTGTTGCTGTGGGATTTGACATGGATTATACTTTGGCACAATACATGCCTGAAACTTTTGAATCCCTTGCTTATCAACGCACGATTGAAAAGCTGGTTTATGATTTGAAATACCCTAGTGAGTTATTGAGTTGGTCATTTGATCCAAATTACATGGTTAGAGGGTTGGTTCTAGACAAAAAGAGAGGCAACATCTTGAAGATGGATTGCCACAAATATGTGAAAGTAGCTTATCATGGATTTAAAGAGTTATCAAAAGAAGATAAAGTTGGGACCTACGGAAATACTTTAGTATGTGATCCTTTTGATGGGCCAGACTATGCTCTAATTGATACCCTCTTTTCTCTTGCGGAAGCCTACTTGTTTGCACAACTGGTTGATTTTAAGGACAGAAATCCTGGAAAGATTCCGATGTCTGTTGATTATGCTTGTCTCTACAATGATGTTCGCAACGCAGTAGATTTGTGCCACCGAGATGGAACATTGAAGCAAAAGGTAGCAACAGATCCCATAAGGTATGTCAATGAAGACACCTCAATAGTTCCCATGCTTAAAATGCTTAGAGATTCTGGGCGAGCAACATTTTTGGTGACAAACAGTTTATGGGACTATACAAATGTTGTCATGAGTTTCCTCTGTGGATCCAGTGGGGTAAATGGCAGTACCAATCTGGACTGGCTTCAATACTTTGATGTCGTCATCACTGGCAGTGCAAAGCCAAGCTTCTTTCTTGAGGGAAATCATGCTAACCTATTTGAGGTTGAGCCTGAGAGTGGAAAGTTACTTAATACAGATAATGGCTCTCCAATGCCTCAGGTGGGTAACATCTCAGCAGGGTTATTGACGAAAGATAAGGACCGTGCTCGTAAGGTTTTCCAGGGAGGCAGCGTCAATCACCTGCATAATCTACTTCCAATAGAATCAAGTTCACAGGTTCTGTATGTTGGAGATCATATTTATGGAGATATACTACGCAGCAAAAAGGTTCTTGGTTGGCGGACAATGTTAGTAATCCCAGAGCTTGAGAGGGAGGTTCAAATCCTCTGGGAATTGAGGGACTATCGCAAGGATCTTCAATTTTTGAGGAGCAAGGATGATTGCATTGCAGATAAAATCCATCATTTGAATCGGTCTCTCAAATTAGAGAATCCAGATGATGATACCAAGCAGAAAATAAATTCAAAACTTAATGAATTGAAGCTTGAAAGAGAGATAGTGCGATCAAATCATCAAGAAGCGCTAAGAAAATTACACCTAAAGTTTCACGAGCCATGGGGCCAGCTGATGAAGACTGGTTATCAGAACTCTCGCTTTGCTCATCAGGTTGAGAGATTTGCCTGCCTTTATACAAGCCGGGTATCTAACTTGGGTCTGTTATCTTCAGACAAGTATTATAGACCCAGTGAAGATTTTATGCAACATGAATTTGGCATTTTGGAAAGTTGA 1860 0.4204 MPFSTTIPIPTSHCSRRGRYLNLSLHNEKFKPFHFVSFSLRNRFSPCHCFASRIFSDAHSPPRFLPFPPPPSSHSASSGDGRLNAKFSRDDIRIEARDESSGGDSAKQLREWLSSPDYGPNTDIGKRIFCNRPLNMKNIVAVGFDMDYTLAQYMPETFESLAYQRTIEKLVYDLKYPSELLSWSFDPNYMVRGLVLDKKRGNILKMDCHKYVKVAYHGFKELSKEDKVGTYGNTLVCDPFDGPDYALIDTLFSLAEAYLFAQLVDFKDRNPGKIPMSVDYACLYNDVRNAVDLCHRDGTLKQKVATDPIRYVNEDTSIVPMLKMLRDSGRATFLVTNSLWDYTNVVMSFLCGSSGVNGSTNLDWLQYFDVVITGSAKPSFFLEGNHANLFEVEPESGKLLNTDNGSPMPQVGNISAGLLTKDKDRARKVFQGGSVNHLHNLLPIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVIPELEREVQILWELRDYRKDLQFLRSKDDCIADKIHHLNRSLKLENPDDDTKQKINSKLNELKLEREIVRSNHQEALRKLHLKFHEPWGQLMKTGYQNSRFAHQVERFACLYTSRVSNLGLLSSDKYYRPSEDFMQHEFGILES* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0617 619 Coils Coil 527 554 - -
Mtr1g0617 619 Gene3D - 289 504 IPR023214 -
Mtr1g0617 619 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 17 619 IPR008380 -
Mtr1g0617 619 CDD HAD_cN-II 129 589 - -
Mtr1g0617 619 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 128 495 IPR008380 -
Mtr1g0617 619 Pfam 5' nucleotidase family 128 614 IPR008380 -
Mtr1g0617 619 SUPERFAMILY HAD-like 126 615 IPR036412 -
Mtr1g0617 619 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 17 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0617 Mtr-Chr1 7051202 7065285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0617 - - gmx:100814787 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0617 1 7051202 7065285 Mtr1g0617 1 7051202 7065285 ECH