Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0594 ATGGCGGGTCGCAGAGATGCATTGCTGACCAGAGATAAGAATCATTCAATCACCGCTTCTCGGATCGCCGTTGCCGTTTTCATCGGTGTTCTTCTTGGTTGCATCTTCGCTTTCTTCTCTCCTCATGGTTTCTTCATTTCCACCACCTCAACTCAGACCATTCTCAGCCACAAGATTGTTTCGACAGAGTGCGAATCGCCAGAACAAGTTAATGTGTTGAAATTGAATATTCAATCAGCTAAAGAGAAGAATTTTGAGCTGAAGAAGCAGGTGAAAGGTCTAATGGAGAAGCTGCGTTTGGCGGAGCAAGGAAAGGGTCATGCTACGGAACAGTTTGTTGTGCTTGGTGAGAAGCACAAGGCTGGTCCTTTTGGTACTGTCAAGGCTCTCAGAACAAATCCTTCTGTTATTCCCGATGAGTCAGTGAACCCTAGATTGGCAAAACTCTTGGCGGAAATTGCTATTTATAAAGAGGTCGTTGTTGTTCTGGCTAACACTAATGTGTTGGAGATGTTACAGGTATGGTTCACCAATATCAAGAAGGTTGGCATATCTAATTATTTGGTTGTTGCATTAGATGACAGAATTGAAGAGTTTTGTAAGTCAAATGATGTTCCTGTCTATAGAAGAGACCCGGATCAAGGTGTTGATTCGATTGCCAAGTCAGGTGGAAACCATGCTGTTTCCGGACTGAAATTTCGCATTTTGAGAGAGTTTCTTCAATTGGGTTACAGCGTTCTCCTCTCAGATGTTGATATTGTGTATTTGCAGAACCCCTTTGATTATATTTATAGGGATTCAGATGTGGAGTCAATGTCGGATGGGCATAATAACCATACAGCTTACGGGTTTAACGATGTCTTTGATGAACCTAAAATGGGTTGGGCTAGATATGCTCATACCATGAGAATATGGGTTTTTAACTCTGGCTTTTTTTACATAAGACCAACACTTCCTTCAATTGAGCTTTTGGATCGCGTTGCGGACCGGCTTTCTAAAGAGAAAGCATGGGATCAAGCAGTTTTTAATGAAGAACTTTTTTACCCTTCACATCCTGGTTATGATGGACTTCATGCTGCAAAGAGAACAATGGATATGTACCTTTTTATGAACAGTAAGGTTCTGTTTAAGACTGTGAGAAAAGATGCTAAGCTCAAGAAGTTGAAGCCTGTGATTGTACATGTTAACTACCATCCTGATAAACTTGCAAGGATGAAGGCTGTAGTCGAGTTCTATGTCAATGAGAAACAAGATGCGCTCGACAGTTTCCCAGATGGTTCTGATTAG 1287 0.4165 MAGRRDALLTRDKNHSITASRIAVAVFIGVLLGCIFAFFSPHGFFISTTSTQTILSHKIVSTECESPEQVNVLKLNIQSAKEKNFELKKQVKGLMEKLRLAEQGKGHATEQFVVLGEKHKAGPFGTVKALRTNPSVIPDESVNPRLAKLLAEIAIYKEVVVVLANTNVLEMLQVWFTNIKKVGISNYLVVALDDRIEEFCKSNDVPVYRRDPDQGVDSIAKSGGNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDYIYRDSDVESMSDGHNNHTAYGFNDVFDEPKMGWARYAHTMRIWVFNSGFFYIRPTLPSIELLDRVADRLSKEKAWDQAVFNEELFYPSHPGYDGLHAAKRTMDMYLFMNSKVLFKTVRKDAKLKKLKPVIVHVNYHPDKLARMKAVVEFYVNEKQDALDSFPDGSD* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0594 428 Pfam Nucleotide-diphospho-sugar transferase 184 405 IPR005069 -
Mtr1g0594 428 PANTHER GLYCOSYLTRANSFERASE 1 428 - -
Mtr1g0594 428 PANTHER ARABINOSYLTRANSFERASE RRA3 1 428 IPR044290 GO:0016757|GO:0080147
Mtr1g0594 428 Coils Coil 70 97 - -
Mtr1g0594 428 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Mtr1g0594 428 SUPERFAMILY Nucleotide-diphospho-sugar transferases 160 368 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0594 Mtr-Chr1 6831448 6834263 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0594 K20783 - gmx:100804935 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0594 1 6831448 6834263 Mtr1g0594 1 6831448 6834263 ECH