Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0588 ATGTTGGAGGCAATGGAAAGTTCAGTGAATGGTGGATTTTCACAACATTTTCAAAGCTTTGTTGGAGATAGTAGTGAAGAAGAACTTTCTGTGCTTCCTCGTCATACCAAAGTTGTTGTTACTGGAAATAACCGTACTAAATCTGTTCTTGTTGGTCTTCGTGGTGTTGTTAAGAAAGCTGTTGGTCTTGGTGGTTGGCATTGGCTGGTTCTTACCAATGGTATTGAAGTGAAGCTGCAGAGGAATGCTCTTAGTGTGATTGAACCACCAACCGGTCTCGAGGAAGATGATGACCTTGAATTTGAAAATACCATTTGGCATGGATCAGATATGGCATCAGATGACACACAAAAGTCCTACAGATCAAGGCCTAGAATGCATAGATCATTAGGATCATCTCACAGGAGCATGAGCAGATCCTTCTCTGTTGATTCACAGTCCAAGGGATCAATTTCTATGCCTCAGGGGTGGACGGTTGACTTGAGTAAATTGGAAATGTCTGCATTGTGGAGATATTGGCGACACTTCAATCTGGTGGATGCTGTTCCAAACCCATCGAAAGAGCAGCTCGTAGATGTTGTTCAGAGGCATTTCATGTCCCAGCAAATGGACGAGTTGCAAGTTATTAGAGGATTTGTCAAAGCTGCAAAGAGGCTTAGGAGGACTATGTGCAAATGA 678 0.4292 MLEAMESSVNGGFSQHFQSFVGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLRGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEPPTGLEEDDDLEFENTIWHGSDMASDDTQKSYRSRPRMHRSLGSSHRSMSRSFSVDSQSKGSISMPQGWTVDLSKLEMSALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQMDELQVIRGFVKAAKRLRRTMCK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0588 225 MobiDBLite consensus disorder prediction 133 147 - -
Mtr1g0588 225 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 225 - -
Mtr1g0588 225 MobiDBLite consensus disorder prediction 112 147 - -
Mtr1g0588 225 PANTHER SAP30 1 225 IPR024145 -
Mtr1g0588 225 Gene3D - 140 225 IPR038291 -
Mtr1g0588 225 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 164 217 IPR025718 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0588 Mtr-Chr1 6778114 6780844 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0588 - - gmx:100806535 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0588 1 6778114 6780844 Mtr1g0588 1 6778114 6780844 ECH