Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0512 ATGGATGTTTCAAATGTTAATAAGTTGCTGGTGAAGAGAGCACCATCCAAAACTTTGGTGGTCCGATTCAATTTGTTCTGTTTTGCCATCTTTCTGATTGTTTATGCAACCCTTCTTCTCCGTCTGCCTTCTTCGGTCTATTTTGATAGTGCAGCCTCACTTGTTGGATGCTCTTTGAGAGAATGCCATCACAAGGCAGAAAAAGGCATACAAATTAAAGGGGTGTTAGAGGAATTACCAAAACCAAAATCATGGAAGCCAAAGGCAAACGGAACTAAGATAGAAGTACCAAATTTTTTAGGCGAAAAAATTGGTAAAGAAATGAAAATTGGAATGGTAAACATGAACGAAGACGACGACATAAGTGAATGGAACATACATGGAGAAATAATACCAATTAATTTCGATAAAGTATCACAATTTTTCAACTGGAAAGATTTATTTCCCGAATGGATCGACGAAGAAGAAGAAAGCGAAGTTCCAACATGTCCTGAATTACCAATGCCAGAATTTGCAACATACGAAAACATGGACATAATAGTTGCAAAGTTACCATGCAAGTATCCAGAAGAAGGATGGGCTAGGGAAGTTTTAAGGTTACAAGTTCATCTTATGGTAGCAAATATGGTTGTGAAGAAAGGGAAGAAAGATTGGAAACGGAAGAGTAGAGTTATTTTTTGGAGTAAATGTAGACCAATGTTGGAGATTTTTAGATGTGATGACTTGGTTAATCATGAAGGTGATTGGTGGTTTTTTGAGGTTGATGTAAAGAGATTGGAACAGAAAGTTTCTTTGCCTGTTGGGTCATGTAATTTAGCTTTGCCTATATGGGAACAAGGGATAGACAAAATGGAACAAAATGTAAGAAGCAAAACAAGAGCAAAACATGAAGCCTATGCAACAATCCTACACTCTTCAGAAAGATATGTTTGTGGAGCAATAACACTTGCACAAAGCCTCCTAAAAACAGGAACCAAACGTGACCTTATACTTCTCATTGACAGCTCCATATCCGTCCGCAAACGTCATGCCTTGAAAGGGGCCGGTTGGAAGATTCGAACCATCACTCGGATTGGAAACCCGAGAGGAAAGAATGGAACCTACAATAAGTATAATTATACCAAGATTCGTTTGTGGCAACTTTCTGATTATGAGAAAATCATCTTTATAGACTCTGATATTTTGGTGCTGAGGAATCTTGATATTCTCTTCAATTTTCCTCAAATGTCTGCTACTGGTAATGCTCGATCCATTTTCAACGCTGGGATGATGGTTATCGAGCCCTCTGATTGCACCTTCAGTGTGCTCATGAACCTGCGCCACGACATCGTATCATACAACGGAGGTGATCAAGGGTTTCTAAATGAGATATTTGTGTGGTGGCATAGGCTTCCAAATCGGGTAAACTATTTAAAGAATTTTTGGGCCAACACAACAGTAGAAGCAAGTGTGAAAAATGGCTTATTTAGTGCTGACCCTCCAAAACTATATGCTATTCACTACCTTGGTTTGAAACCTTGGCATTGCTATAGAGACTATGATTGCAATTGGGATGTGGTGGACCAAAGGGTTTATGCAAGTGATGTGGCGCACCAACGTTGGTGGAATTTTCATGATAGAATGGACAAGAATTTACAAAGTTTTTGTAGGTTGACAAGACAACGTAGGACTGAGTTGAATTGGGAAAGGAGAAGATCTAGTAACATGGGATCACTTGATTATCAATGGAAGGTTAAAGTCATTGATCCTAGAAATTCTGACTCTCATTTGATGGATTAA 1779 0.3873 MDVSNVNKLLVKRAPSKTLVVRFNLFCFAIFLIVYATLLLRLPSSVYFDSAASLVGCSLRECHHKAEKGIQIKGVLEELPKPKSWKPKANGTKIEVPNFLGEKIGKEMKIGMVNMNEDDDISEWNIHGEIIPINFDKVSQFFNWKDLFPEWIDEEEESEVPTCPELPMPEFATYENMDIIVAKLPCKYPEEGWAREVLRLQVHLMVANMVVKKGKKDWKRKSRVIFWSKCRPMLEIFRCDDLVNHEGDWWFFEVDVKRLEQKVSLPVGSCNLALPIWEQGIDKMEQNVRSKTRAKHEAYATILHSSERYVCGAITLAQSLLKTGTKRDLILLIDSSISVRKRHALKGAGWKIRTITRIGNPRGKNGTYNKYNYTKIRLWQLSDYEKIIFIDSDILVLRNLDILFNFPQMSATGNARSIFNAGMMVIEPSDCTFSVLMNLRHDIVSYNGGDQGFLNEIFVWWHRLPNRVNYLKNFWANTTVEASVKNGLFSADPPKLYAIHYLGLKPWHCYRDYDCNWDVVDQRVYASDVAHQRWWNFHDRMDKNLQSFCRLTRQRRTELNWERRRSSNMGSLDYQWKVKVIDPRNSDSHLMD* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0512 592 PANTHER GLYCOGENIN SUBFAMILY MEMBER 8 586 - -
Mtr1g0512 592 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 295 546 IPR029044 -
Mtr1g0512 592 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 8 586 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Mtr1g0512 592 CDD GT8_Glycogenin 297 541 - -
Mtr1g0512 592 SUPERFAMILY Nucleotide-diphospho-sugar transferases 297 546 IPR029044 -
Mtr1g0512 592 Pfam Glycosyl transferase family 8 302 508 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0512 Mtr-Chr1 5965430 5968444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0512 89 591 Glycosyltransferase AT4G33330 63.922 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0512 K20890 - gmx:100780684 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0512 1 5965430 5968444 Mtr1g0512 1 5965430 5968444 ECH