Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0459 ATGGAGGAGGAGAATCTTCTTGACACAACAAAACTCAAACGACAACATACAGAAACCACCGTAACAAACTCACCACTCTCCACCACCACCACCACTGCCATGACCTCCGTCGAACATCCTCTAAAAAAGCGAAAGCTCCACGATTCTCCACCGTCGCAATCGCCACAACCGGAAACTAGCTCTCACTTTCTGCAAACCCTACCTACTCCGCCGTTGTCTCCAGACGAAATTCTCGCGAAACGCAGAAACAAAGACGCAATTCGAAATCTCTATGAAGGTTACAAGCGAATTAAACGTTGCATCCTTCAGAAACAATCTTCCTCCATGCCTGATCTTGATCAGAATTTTCTTGCTCTCATCGCTTCTTCAAGAGGTTGTACGAGTGTACAAAGAATTGTGGCCAATTTAATTCCTCAATATGCTGGTCACTGTCCAACAGCTTTGGAAGCCGCAGCCAAAGTCGTTATCAATATGCATAACTGGAGTTTGGCATTGACTAGTAAGGAAGAGGATTCCAATGGTATTGCATTTGAAACTGCTAAGGCATGTATTTTCGGATTGGCTGATATTTGCTGCATTGCTTCTTCAGTAGCACCAACATCAGCTGTAATTAGAGGAATTCGCTCAACAGTTTTTCAAAATGTGCTCACCTTTTTTGTTCCCTTATTTGAGGGAAATGATGTCTTAAAGATGATTGACAAGAATTTCCTGAATATGCAAGATAATCCCGAGGTCTTTTCTGAATTGAAACAAAAGGTTTTAGATGAAGATGATTCTTCATTGACTAAATTGTCTAAGTTCCGTGCATTATGTATACTTAGGGTATTCTTCTCTTGTCCAAAAGAATTGCTTGCAGCTTGTTTGGAACTCTTAGGCTCCACCACAAAAGAGGGATCTTCTAACGAAGGACAGCGTTTTCTGAGCATGGTGACTAGCATGCTTAATTATGATGAAGCAGTTCACCTTTTGGGTAGAGCAAATGATGGACCTAAATCATGTAACGGTTTTATTGAGGAAGGCATCAAAGAGATTGAGGTTGGCGAGAAAGCCGTCACCAATGACAACCATATCTCCGATGCGATTCAAAAGAGCTGTTTGCTTATGCTGGTTCTTAACAAGGACCCCTCACTGCGGAAGTGGACTCTGCGCCGATGTAAGAAGTTGCTTGACTCGCTCACTAATGCTTCACCGGAAACTACATCAGTATTGCAAGGAATTCTTGGAATGTTCGCTCAACAGACAGAGTTAGAAGACTGTCAAGTAGATAGTGATGAAGACAAGTCCGATTCTTCAATCTTCACGAATAGAAACTATGTGATTCCTAGGATCTCCGAGGAACTTGAAAATATTGGTGAAAGATCACAAAAAGGGGTATCAAGGTCTGTGGGCGTTGAGAAAGGTGATATACCCCATGTTAGATGTTCCACACCTAGGGACTCTGTAAGCCATCAGATGTTCTCACCTACAGTTAGAACAGCAGTAGACTTTAGGAGTAATTCATTTGATGGTAGAAATGAATTCCCAAATGTTGAGAAAAATCAAGTTTCAAATATAAATTTCAATTCACCTCTGTCGAGGTCCTCTAGTGGAGCTGTCAGCAATGTTCTGGCGTCTCCCAATCATCGTTTTATGTCACCAAATTCTTTAACCAAAAGTCAAATTGTTTTGTGCTTTGACGGGGATCCTGCTGCTGTAGATATTGTTGCTGCTTCTAGGCAGCTATGGGTAGGTTGTGTGGCACCTGACATGCCTGAAAGCCATATTAGGTTTCAAATAGAGAGGTTTGGTCCTATTGAAAAGTTTATATTCTTCCCATCGAATGGATTTGCTTTAGTTGAGTACAGAAGGATAATGGACGCAATAAAAGCTCGACACTGTGCACCTGGAAATTTTCCTTGCCGTGTAAAATTCATGGATGTGGGACTTGGTAGTAGGGGTGCAGTGAATGGTGTTGCAGTTGGCTCTAGTTCTCATATTTATGTTGGAAATGTTTCCAGTCAATGGGCCAAGGATGAGATTCTTCATGAATCAAGGAAAGTAGTTTATAAGGGTCCTCTCGCTGTGATTGATCTTAGCTTTGAGTGTGCGTTGCTTATGGAGTTTGATAGCCCTGAAGAAGCTGCCTCCGTCATGTTGCATCTGAGACAGCTCCGAAGAGAAAGAAGTAGTTATAGCCCACATTTTGGTCCAGGAACAGTTAATGTTGTAAGTGGGCATGGTTATATGGATGGTGCAAGACCTTTGCCCGCCCCTGCTCACCTGGACCTCAAGGTCAGCAACTCTGCTGGATCACCTCATGCTCGAGCTTTACATGGGAGCCCTGCCGACAGCAGTCGAACAAGAATGTCTCACTTGTGTAACATACTAGCTTCATTGCGTGCAAAGTATAATATTAATCAAAACATAGGTCTCCATGATAACTATATGACTGGAAATAGTTGCGCTTCTTCCACGCGTGAGGAAGATGTAGTGCCATCCAACACTCTGTGGATAACAATTCCTCATAGTAGCTCCCAGTTCCTCACAGATGATGAGCTAATGAGTATTTGCAACCTTGCTATTGGAAACTCTGGTTCCATTGCACGGTTGAGACAAGCAAAAATGCACATGGGATGTGGTTGGTTTGTTGAATGTAGTAATGTTGACGGAGCAGTTACAATCTTACAGAATCTGCGTGGTTGTCCAGGACTGTTTTTCCAAATAGAATTCAGCAATCCAGGGAATCAGAATGCTGTTCCATTTGCAATTAAACCTGAAAACCGTGCTATGGAGCTTGTCTCCCCCAGAATGAATGCTGAGAATCGTAGTAGTGGAGGACATGGCGCACCTCTGTCTCAATCAAACTGGCACTTCCCTGATTCAAGAGAGATACCAGAAGTTGGAGGAAGGAAACCTGATGGTTATGATCATTTATCACTAGATCCTCGTCAAGGAGGAAATGTTCCACATGCATACTCTGGAGCACATGGACCTTCCATTCCACCACCACAACAAATTCAGTCATCTCCTTTCACCCGCCCTGTTTATGTTCCTCCAAATGGCCAATGGGATCCCCATGGAATAAACAATCAGTTACCTGTCAATCAATACCAAACTGTTGTAATGCCAAATAATTTTAATGCAAGTCCTTTTATACCTGTTTCAGTAACTCCACTTGCTCAAATACAAGGAACTCCAATGCAACCGTATAACCAGCAGATTCCTCCCTCAATTGTACCACCACCCTTATCATCCTTGCCACCTCCTCAGCCTGAAATGCCACCTCCTCATCCACATCCTCCTTCTCAGCCACCTCTACCTGAGACACAACCACCCTTGGTTCCTCCACCTCCTCCACCTGGTTCTCCTCCTCCACCTCCTCCTCCGCTGCCTGTCCAAGAACCAGTCAGTGTGGAATGTTCGGGGCAGCCGCTGCAGTATCAGTGGCAGGGAAATCTCTGTAAAAGTGGAGTTAGCTACTGTACAATTTATGCATGCAGGGCAGATTCAAATATTTGCAGCTATTCAAATGTCATGCCTGAGCCTGCTGAATGGCCCACCAAATTAGACATGACTAAGCGCACAGATTTTAAACATGTGCAATCAACATTTGCTGCTACTCCATCTCATAGAAGGGAAGTGTGCCGTTTAATCCCATCTTCCACAAGTGAAGACAGAAGGTTTCAGGATTTTGTATCATATTTAAAACAGAGGGATTGTGCTGGAGTTATAAAAGTCCCAGCTTCAAAATCCATATGGGCAAGGCTGCTATTTTTACTTCCTCATTCACTTGAAATGTGCTCGTTGCTTTCTATTGCACCCGATCCATCTGATTGCCTGATTGCTTTGGTTTTACCCAAAGAAACAAACTCTGACTGGTTATAA 3864 0.433 MEEENLLDTTKLKRQHTETTVTNSPLSTTTTTAMTSVEHPLKKRKLHDSPPSQSPQPETSSHFLQTLPTPPLSPDEILAKRRNKDAIRNLYEGYKRIKRCILQKQSSSMPDLDQNFLALIASSRGCTSVQRIVANLIPQYAGHCPTALEAAAKVVINMHNWSLALTSKEEDSNGIAFETAKACIFGLADICCIASSVAPTSAVIRGIRSTVFQNVLTFFVPLFEGNDVLKMIDKNFLNMQDNPEVFSELKQKVLDEDDSSLTKLSKFRALCILRVFFSCPKELLAACLELLGSTTKEGSSNEGQRFLSMVTSMLNYDEAVHLLGRANDGPKSCNGFIEEGIKEIEVGEKAVTNDNHISDAIQKSCLLMLVLNKDPSLRKWTLRRCKKLLDSLTNASPETTSVLQGILGMFAQQTELEDCQVDSDEDKSDSSIFTNRNYVIPRISEELENIGERSQKGVSRSVGVEKGDIPHVRCSTPRDSVSHQMFSPTVRTAVDFRSNSFDGRNEFPNVEKNQVSNINFNSPLSRSSSGAVSNVLASPNHRFMSPNSLTKSQIVLCFDGDPAAVDIVAASRQLWVGCVAPDMPESHIRFQIERFGPIEKFIFFPSNGFALVEYRRIMDAIKARHCAPGNFPCRVKFMDVGLGSRGAVNGVAVGSSSHIYVGNVSSQWAKDEILHESRKVVYKGPLAVIDLSFECALLMEFDSPEEAASVMLHLRQLRRERSSYSPHFGPGTVNVVSGHGYMDGARPLPAPAHLDLKVSNSAGSPHARALHGSPADSSRTRMSHLCNILASLRAKYNINQNIGLHDNYMTGNSCASSTREEDVVPSNTLWITIPHSSSQFLTDDELMSICNLAIGNSGSIARLRQAKMHMGCGWFVECSNVDGAVTILQNLRGCPGLFFQIEFSNPGNQNAVPFAIKPENRAMELVSPRMNAENRSSGGHGAPLSQSNWHFPDSREIPEVGGRKPDGYDHLSLDPRQGGNVPHAYSGAHGPSIPPPQQIQSSPFTRPVYVPPNGQWDPHGINNQLPVNQYQTVVMPNNFNASPFIPVSVTPLAQIQGTPMQPYNQQIPPSIVPPPLSSLPPPQPEMPPPHPHPPSQPPLPETQPPLVPPPPPPGSPPPPPPPLPVQEPVSVECSGQPLQYQWQGNLCKSGVSYCTIYACRADSNICSYSNVMPEPAEWPTKLDMTKRTDFKHVQSTFAATPSHRREVCRLIPSSTSEDRRFQDFVSYLKQRDCAGVIKVPASKSIWARLLFLLPHSLEMCSLLSIAPDPSDCLIALVLPKETNSDWL* 1288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0459 1287 MobiDBLite consensus disorder prediction 16 37 - -
Mtr1g0459 1287 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 34 1286 - -
Mtr1g0459 1287 MobiDBLite consensus disorder prediction 1066 1127 - -
Mtr1g0459 1287 Gene3D - 563 644 IPR012677 -
Mtr1g0459 1287 MobiDBLite consensus disorder prediction 1 15 - -
Mtr1g0459 1287 MobiDBLite consensus disorder prediction 956 971 - -
Mtr1g0459 1287 Pfam SPOC domain 1136 1278 IPR012921 -
Mtr1g0459 1287 MobiDBLite consensus disorder prediction 50 68 - -
Mtr1g0459 1287 SMART rrm1_1 573 636 IPR000504 GO:0003723
Mtr1g0459 1287 MobiDBLite consensus disorder prediction 1059 1130 - -
Mtr1g0459 1287 SUPERFAMILY RNA-binding domain, RBD 564 631 IPR035979 GO:0003676
Mtr1g0459 1287 MobiDBLite consensus disorder prediction 931 952 - -
Mtr1g0459 1287 PANTHER NUCLEIC ACID BINDING PROTEIN 34 1286 - -
Mtr1g0459 1287 MobiDBLite consensus disorder prediction 931 1023 - -
Mtr1g0459 1287 MobiDBLite consensus disorder prediction 1 76 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0459 K18667 - gmx:100798033 1464.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0459 1 5312800 5326454 Mtr1g0459 1 5312800 5326454 ECH