Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0397 ATGGCTGATTCAACACCTACCGATTCCGTGTCGGTGGATATTGATTCCATCTCTCCTTCACCTAAGGAGCATATTATCAGAACATGTCATGGTTCTGTCTCTGTTGCTGTGTATGGGGACCAGGACAAACCAGCTCTAATCACCTATCCTGATTTGGGTTTAAATTACGTCTCCTGCTTTCAGGGGTTATTATTTTGTCCAGAAGCATATTATTTGCTGCTCCACAATTTTTGCATATATCACATTAGTCCACCTGGGCATGAGTTGGGAGCAGCTGCAATTGATCCAGATTATCCTGTTCTATCTGTAGATGACTTAGCGGATCAAATAGCTGAGGTGCTTAACTTTTTTGGTCTTAATGCAGTTATGTGTATGGGAGTAACTGCCGGGGCTTACATTCTTACCTTATTTGCTATGAAATATCGACAACGTGTTCTTGGTTTGATACTTGTTTCTCCTCTATGTAAAGAACCATCTTGGTCTGAATGGTTGTACAACAAGGTCATGTCAAATTTACTGTACTTTTATGGCATGTGTGGGGTGGTGAAGGAAATATTGCTGAAGCGGTATTTTAGCAAGGAAATCCGCGGTGGTACTCAATTTCCGGAGTCAGATATAGTCAAAGCATGCCGAAGGTCTTTGGATGAGAGGCAAAGCTTGAACGTGTGGCGGTTCCTTGAAGCTATTAATGGGAGACCTGACCTAAGTGAAGGATTGAGAAACCTACATTGCCGGTCACTAATTTTTGTTGGGGATATGTCTCCATATCACTCAGAGTCACTCCATATCACTAAAAAGTTAGACAGACGATTCAGTGCCTTAGTTGAGGTTCAAGCATGCGGGTCAATGGTAACAGAGGAGCAGCCCCATGCTATGTTAATACCAATGGAGTACTTTCTCATGGGGTATGGTCTGTACAGGCCATCCAGGAAGAGTGTCAGCCCAAGAAGTCCCTTGAGTCCATCTTGTATTTCTCCTGAGCTTTTTTCACCTGAGAGTATGGGTTTGAAATTGAAACCTATAAAGACTAGAATTACTGGGGAAATTTAA 1050 0.4248 MADSTPTDSVSVDIDSISPSPKEHIIRTCHGSVSVAVYGDQDKPALITYPDLGLNYVSCFQGLLFCPEAYYLLLHNFCIYHISPPGHELGAAAIDPDYPVLSVDDLADQIAEVLNFFGLNAVMCMGVTAGAYILTLFAMKYRQRVLGLILVSPLCKEPSWSEWLYNKVMSNLLYFYGMCGVVKEILLKRYFSKEIRGGTQFPESDIVKACRRSLDERQSLNVWRFLEAINGRPDLSEGLRNLHCRSLIFVGDMSPYHSESLHITKKLDRRFSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPSRKSVSPRSPLSPSCISPELFSPESMGLKLKPIKTRITGEI* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0397 349 PANTHER N-MYC DOWNSTREAM REGULATED 7 348 IPR004142 -
Mtr1g0397 349 Pfam Ndr family 23 307 IPR004142 -
Mtr1g0397 349 Gene3D alpha/beta hydrolase 17 302 IPR029058 -
Mtr1g0397 349 PANTHER PROTEIN NDL2 7 348 - -
Mtr1g0397 349 SUPERFAMILY alpha/beta-Hydrolases 32 300 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0397 Mtr-Chr1 4477872 4483172 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0397 - - gmx:100815084 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0397 1 4477872 4483172 Mtr1g0397 1 4477872 4483172 ECH