Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0395 ATGATATTTGCTTTTGACACCCCCCAAAGCAATAAGAAAAACACACACAAAATGGCTTCGGTGCATAATATTCAAGGTCTAACAGAAGAAGAATACAAAGAACTCGAACCAATCATAAAAAAATACCACATATTAGAACCAACCTCAAACACATGCACTTCAATCATAACCTACAAAATAGAAGCACCATCAAGCATAGTGTGGCCATATGTTAGAAGCTTTGAGAATCCACAAAAATACAAACATTTCATCAAAGGTTGCAACATGAAAGGTGATGGAAACGTTGGTAGCATTAGAGAAGTTACCGTTGTTTCGGGTTTACCGGCTTCGACAAGTACCGAAAGATTAGAGATTTTGGATGATGAAAAACATGTAATAAGTTTTAGAGTTGTTGGTGGTGAACATCGTCTTCAAAACTATCGTTCGGTTACTTCGGTTAATGAGTTTGTCAACAATGAAGGTAAGGTTTATACTATTGTTTTGGAATCTTATATTGTTGATATTCCACATGGGAACACTGAAGAAGATACCAAGATGTTTGTTGACACTGTTGTCAAGCTTAATCTTCAGAAACTTGGAGTTGTTGCTATGAGTTCATGTTCTTCCATGCATGGACAATAA 621 0.3607 MIFAFDTPQSNKKNTHKMASVHNIQGLTEEEYKELEPIIKKYHILEPTSNTCTSIITYKIEAPSSIVWPYVRSFENPQKYKHFIKGCNMKGDGNVGSIREVTVVSGLPASTSTERLEILDDEKHVISFRVVGGEHRLQNYRSVTSVNEFVNNEGKVYTIVLESYIVDIPHGNTEEDTKMFVDTVVKLNLQKLGVVAMSSCSSMHGQ* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0395 206 SUPERFAMILY Bet v1-like 52 192 - -
Mtr1g0395 206 Gene3D - 9 205 IPR023393 -
Mtr1g0395 206 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 28 205 - -
Mtr1g0395 206 PANTHER - 28 205 - -
Mtr1g0395 206 CDD PYR_PYL_RCAR_like 59 192 - -
Mtr1g0395 206 Pfam Polyketide cyclase / dehydrase and lipid transport 59 192 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0395 Mtr-Chr1 4460890 4461703 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0395 K14496 - gmx:100778183 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0395 1 4460890 4461703 Mtr1g0395 1 4460890 4461703 ECH