Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0393 ATGTCTTCGCCTCCTTCTTGTTCCGCCGCTGACGATACTCTCATGCGCAACCGTATCCTCTCTACCAAACTCTACTTCGACGTACCTCCCTCCAAAGTTCCGCTTATCTACTCTGATTCTTACGACATATCATTTCTCGGCATAGAGAAACTGCATCCGTTTGATTCGTCTAAATGGGGACGAATTTGTAAGTTTCTTATTTCTTTTGGTGTTTTGGATAAAAATCGCATCGTTGAGCCTCTTGAAGCTTCTAAAGATGATCTTCTAGTGGTACACTCAGAATCATACTTGAATAGTCTGAAGGAAAGTTCCAACGTTGCCAAGATAATTGAGGTCCCTCCTGTGGCATTGTTTCCCAATTGTCTTGTGCAACGTAAAGTTCTTTTCCCATTCAGGAAACAGGTTGGAGGAACTATATTGGCTGCGAAACTTGCGAAGGAGAGAGGATGGGCCATTAATGTGGGAGGAGGTTTTCATCACTGTTCTGCAGAAAATGGTGGTGGATTTTGTGCTTACGCAGATATTTCTCTATGCATCCACTTTGCTTTTGTTCAGTTGAATATATCAAGGGTGATAATTATTGATCTTGATGCACATCAAGGAAATGGTCATGAAATGGACTTTGCCGATGATAACCGAGTCTACATTCTGGATATGTATAACCCTGGAATATATCCTTTGGATCATGAGGCAAGAAGCTACATAAATCAGAAAGTTGAAGTGAAGAGCGGGACTCGTACAGAAGAGTATCTGCTGAAATTAGATGAAGCACTCGAGGTTGCTGGGCGAAGGTTTAACCCTGAGTTGTTAGTTTATAATGCTGGAACTGACATCCTAGAAGGTGATCCATTAGGAAGGCTGAAGATTAGTCCTGATGGAATTGCTCTTAGAGATGAGAAAGTTTTTCGGTTTGCTCGCAAGAAGAACATTCCTATTGTCATGCTCACTTCAGGTGGATACATGAAGTCCAGTGCTAGGGTCATCGCAGATTCAATTCTCAATCTAGAGAAGAAATGCTTGATAGAAACGAGTGGAGATCCAAAGACTGCATAA 1053 0.4188 MSSPPSCSAADDTLMRNRILSTKLYFDVPPSKVPLIYSDSYDISFLGIEKLHPFDSSKWGRICKFLISFGVLDKNRIVEPLEASKDDLLVVHSESYLNSLKESSNVAKIIEVPPVALFPNCLVQRKVLFPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAENGGGFCAYADISLCIHFAFVQLNISRVIIIDLDAHQGNGHEMDFADDNRVYILDMYNPGIYPLDHEARSYINQKVEVKSGTRTEEYLLKLDEALEVAGRRFNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFARKKNIPIVMLTSGGYMKSSARVIADSILNLEKKCLIETSGDPKTA* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0393 350 Gene3D Histone deacetylase domain 32 346 IPR037138 -
Mtr1g0393 350 CDD HDAC_classIV 52 335 IPR044150 GO:0004407|GO:0016575
Mtr1g0393 350 PANTHER HISTONE DEACETYLASE 11 9 345 - -
Mtr1g0393 350 PANTHER HISTONE DEACETYLASE 11 9 345 - -
Mtr1g0393 350 Pfam Histone deacetylase domain 52 333 IPR023801 -
Mtr1g0393 350 SUPERFAMILY Arginase/deacetylase 30 334 IPR023696 -
Mtr1g0393 350 PRINTS Histone deacetylase superfamily signature 156 179 IPR000286 -
Mtr1g0393 350 PRINTS Histone deacetylase superfamily signature 190 205 IPR000286 -
Mtr1g0393 350 PRINTS Histone deacetylase superfamily signature 267 277 IPR000286 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0393 K11418 - gmx:100781276 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0393 1 4433423 4439218 Mtr1g0393 1 4433423 4439218 ECH