Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0375 ATGTTGGAACAATCATTAACATCATCATCACCAACATTCTGGGCTGGTCTCTACAGCTGGTTTACTCCCACCATCTTCTTCCTCCTCCTTCAACTTGTCATAGCTACCATTTACATCACTTCCACTCTTGCCAATGCCACCCAAAAACATCTCCAACAACAAGATCCTAACTTTCAACAACCCCATCACCAACAACTCTTTAGATCTCCTTCTGTTTTACAAAGACTCAAATCCATCAACTTTTACTCTTACCAACCTTATAGATCCCAACAAGAACAACCTCAACAATATCAACAACTTCAAACGTACGAAAATGAAATCCATGTTCCTCAACTTGCTAGATCTCCTTCTGTTTTACAAAGACTCAAATCCATTAACCTTTATAGTTACTTACCTACACAACCCTTCACTACAAAGCTCTCACCCGACAACAGTAACAACGTTTTCACTCATGAAACTCATAAACAACACGTGGAAGTTAAGGAAACAGAGGAGGAACATGAGGAAGATGATGTTTTGGGACATATAAGAGACAACCTAGGAGGAAGCTACGAAGAAGAGGGACATGTTTCTATAGAAGAGGTTTTCATGAAGTTGCAAGGCCAAGGAGGTAATTTCACAAGGACACATTCAGACACTAAGCCGGATTCCGGGGAGGTTCCGGTGAAGCTGTCGAGGAAGATGAAGAAATCTGCTAGCAGTAAATCTGCTTTTTCACATTTTAAGGAAGATGACATTGTGGAGAAACGCCGGCCAGCCACCGTGAAAGAGGCGAAGGTTGTTCCGGCTGCAGTGGATGAGGATGAGTTGGTTGATTCTAAGGCTGATGATTTCATCAACAAGTTTAAGCAGCAGTTGAAGTTGCAGAGGATTGATTCTATTATGAGGTATAAGGATATGATTAACAAAGGAAGTAGCAAGTAA 924 0.4123 MLEQSLTSSSPTFWAGLYSWFTPTIFFLLLQLVIATIYITSTLANATQKHLQQQDPNFQQPHHQQLFRSPSVLQRLKSINFYSYQPYRSQQEQPQQYQQLQTYENEIHVPQLARSPSVLQRLKSINLYSYLPTQPFTTKLSPDNSNNVFTHETHKQHVEVKETEEEHEEDDVLGHIRDNLGGSYEEEGHVSIEEVFMKLQGQGGNFTRTHSDTKPDSGEVPVKLSRKMKKSASSKSAFSHFKEDDIVEKRRPATVKEAKVVPAAVDEDELVDSKADDFINKFKQQLKLQRIDSIMRYKDMINKGSSK* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0375 307 Pfam Cotton fibre expressed protein 269 302 IPR008480 -
Mtr1g0375 307 PANTHER OS06G0566500 PROTEIN 92 306 - -
Mtr1g0375 307 PANTHER OS06G0566500 PROTEIN 1 91 - -
Mtr1g0375 307 PANTHER COTTON FIBER (DUF761) 1 91 - -
Mtr1g0375 307 PANTHER COTTON FIBER (DUF761) 92 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0375 Mtr-Chr1 4275763 4289278 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0375 - - mtr:MTR_1g016100 540.036