Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0373 ATGGTAACACAAACTGAACCGTTGCTAAAACCAACCTACATTTCATTGCAAGAACTTCAAAAACACAACACTCGCGGCGATGCATGGATCTCCATTGACGGCAAGATCTACGACGTTTCAAAATGGGCCAACCACCATCCCGGCGGCGAGCTTCCTCTCCTCAACCTCGCCGGCCAAGATGTCACCGATGCATTCCTCGCTTTCCACCCTCCATCCGCTTACAAACACCTCCAAAACTTTGCCACTGGCAGTTACCTACGTGACTACGTCGTCTCTGACGTCTCACGTGACTATCGTGCCCTTTTCTCCGAACTAACCAAACTGGGTTTGTTCGAAGAGAAAGGACACGGTGTTTTACTTTTACTGTCCATTATTTCTGTTATGTTCTTTGTCAGTGTTTATGGTGTTTTGTTTTGTGATAGCGCGGTTGTGCACGTGCTTTCTGGAGGATTAATGGGTCTTCTTTGGATTCAAAGTGGTTGGATTGGTCATGATTCTGGTCATTATCAGGTTATGGTTAACCGGAAATGGAATCAGTTTATGCAGATTCTTTCTGGTAATGTTCTTGCTGGTATAAGCATTGAATGGTGGAAATGGAATCATAATGCACACCATCTTGCTTGTAATAGTCTTGATTTTGATCCTGATCTTCAACATTTACCTTTTTTTGTTGTTTCCTCCAAGTTCTTCACTTCACTAACTTCTTGTTTTTATGGAAGAAAGATGAATTTTGATTCTTTTGCTAGGTTCTTGGTTAGTTACCAGCATTGGAGTTATTATCCTGTTATGTGTTTTGCTAGGCTTAATTTGTTTGCTCAATCTTTCTTTTTGTTGTTTTCTAATAGAAAAGTGCCTAATAGAAAGATGGAACTTTTAGGGTTGGCTCTGTTTTGGATTTGGTACCCTTTGTTGGTTTCTTGTTTACCTAATTGGGGTGAGAGGGTTTTATTTGTGCTTGCTAGTTTTTGTGTGACTGGGATTCAACATGTTCAGTTTACTTTGAATCATTTTTCGGCTAGTGTTTATGTTGGTCCACCGACGGCTCATGATTGGTTTGAGAAGCAAGCTCATGGAACTCTTGATGTGAAGTGTTCTTCTTGGATGGATTGGTTTCATGGTGGTTTGCAGTTTCAGATTGAGCATCATTTGTTTCCGCGTCTTCCACGATGTAATTTGAGGAAGATTTCACCTTTGGTTAAGGATCTGTGCAAGAAACATAATCTTCCTTACAATTGTGTGTCTTTCTGGAAGGCTAATGTGCTTACTATTCAGACTTTGAGGAATGCGGCTTTGCAGGCGAGGGATCTTACTAAACCAGTTCCTAGAAATTTAGTTTGGGAAGCTGTTAATACTCATGGATGA 1362 0.4097 MVTQTEPLLKPTYISLQELQKHNTRGDAWISIDGKIYDVSKWANHHPGGELPLLNLAGQDVTDAFLAFHPPSAYKHLQNFATGSYLRDYVVSDVSRDYRALFSELTKLGLFEEKGHGVLLLLSIISVMFFVSVYGVLFCDSAVVHVLSGGLMGLLWIQSGWIGHDSGHYQVMVNRKWNQFMQILSGNVLAGISIEWWKWNHNAHHLACNSLDFDPDLQHLPFFVVSSKFFTSLTSCFYGRKMNFDSFARFLVSYQHWSYYPVMCFARLNLFAQSFFLLFSNRKVPNRKMELLGLALFWIWYPLLVSCLPNWGERVLFVLASFCVTGIQHVQFTLNHFSASVYVGPPTAHDWFEKQAHGTLDVKCSSWMDWFHGGLQFQIEHHLFPRLPRCNLRKISPLVKDLCKKHNLPYNCVSFWKANVLTIQTLRNAALQARDLTKPVPRNLVWEAVNTHG* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0373 453 Pfam Fatty acid desaturase 150 412 IPR005804 GO:0006629
Mtr1g0373 453 Gene3D - 3 85 IPR036400 -
Mtr1g0373 453 PIRSF FA_sphingolip_des 1 441 IPR012171 GO:0016491
Mtr1g0373 453 Pfam Cytochrome b5-like Heme/Steroid binding domain 16 84 IPR001199 -
Mtr1g0373 453 PANTHER FATTY ACID DESATURASE 2 12 452 IPR012171 GO:0016491
Mtr1g0373 453 SMART Cyt_b5_2 14 86 IPR001199 -
Mtr1g0373 453 CDD Delta6-FADS-like 146 408 - -
Mtr1g0373 453 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 12 452 - -
Mtr1g0373 453 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 11 87 IPR036400 -
Mtr1g0373 453 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 11 95 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0373 Mtr-Chr1 4260315 4261907 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0373 1 453 Lipid Metabolism Gene Families AT2G46210 62.914 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0373 K21737 - ini:109158372 746.117