Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0366 ATGGAGAACATTAGAGAGGATGCATCCCCAAACAATATCAATTCTGAACAGCCATACAGAACTTGGTACCACTTTCAGCCCCTAAAAAATTGGATGAATGATCCTAATGGACCAATGTACTATAAAGGTGTTTACCATTTATTCTACCAATATAACCCTGATGCAGCAACATTTGGTCATGAGAAAATGGTATGGGGTCATTCTATATCAAATGATCTCATAAATTGGACTCATCTAAATGATGCTATTGTACCAACTATACCTGGTGACATAAACAGTTGTTGGTCAGGTTCAGCCACTATACTCCCAGGTGAAAAACCTGCTATGTTGTATACAGGAATTGATCAAAATAGACACCAAGTTCAAAATTTAGCCATGCCAAAGAATCTGTCTGATCCTTACTTAAGGGAATGGGAAAAACATCCTCAAAATCCTTTGATGACTCCACCTAGTGGAGTTGAAGTCGGTGAATTCCGAGATCCTTCAACTGCATGGCAAGGAAAGGATGGAAAATGGAGGGTAATTATTGGTGCTCAAAATGGAGATGAAGGAAAAATTATTCTTTACAAAAGTGAGGATTTTGTTAAGTGGATAGTGGATCCTATACCTTTCTTTGCAACAGATGATACCGGAGTTTGTGAATGTCCAGATTTTTTTCCTGTGTATATCAATAACACAAATGGAGTTGATACAACTATGGAAAATTCAAGTGTTAGACATGTCTTGAAGATAAGCTATCTACGTAGACGTCATGACTATTACTTTATTGGAAAATATGTATCTGATAAGGAAGAGTTTGTTCCTGATGTAAAATATACTGGAACTTGGAAGGAATTGAGATTTGACTATGGAAAGGTTTATGCTTCAAAGTCATTTTTTGACCATGCTAAGAACAGGAGAATATTATGGGCATGGGCGGAAGAGTCCGACACTAGTGAAGATGACATTCAAAAAGGATGGGCTGGTCTTCAGACAATTCCAAGGAAGTTCTGGCTTGATAAGAATGGGAAGCAATTAATGCAATGGCCAATTGAAGAGTTAGAAAAACTTCGTGGCAAACAAATCAATATCACCGGAGAAACACTCCAAAGTGGATCAACTCTTGAAGTAAAAGGTATCACTGCATCTCAGGCTGATGTGGAAGTCTTGTTTGAGCTACCCAATCTACAAAGTGCTGAGTTGCTAGAACCAAGTGAAGTTGATCCTCAAGAACTCTGTAAAGAACAATATGCATCAAGAAATGGCATGATAGGACCATTTGGTTTGCAAGCTTTAGCATCAAAAGACCAAACAGAGAGGACTACAATATCTTTCCGAATATATAGAGCCGGCGATGGATTCAAATGCTTGATGATAAGTGACCAGACCAGGTCTTCATTGCGGGAGGACGTTGAAAAAACCTCATATGCAACTATCTTTGACATTGATCCCAATCTCAAAACAATTTCACTTAGAAGCTTGATTGACCGGTCCATTATAGAGAGTTTTGGAGATGGAGGGAGAGCTTGCATAACAAGTAGAGCTTATCCCTTATTTGCTACAGATAAAGATGCACATCTTTTTGTATTCAATGATGGAAGCCAAAGTGTGGTTATCTCACAACTGAATGCTTGGAGCATGAAGCAAGCACAGTTTGGCACAGAAAGCATAATATAG 1656 0.3847 MENIREDASPNNINSEQPYRTWYHFQPLKNWMNDPNGPMYYKGVYHLFYQYNPDAATFGHEKMVWGHSISNDLINWTHLNDAIVPTIPGDINSCWSGSATILPGEKPAMLYTGIDQNRHQVQNLAMPKNLSDPYLREWEKHPQNPLMTPPSGVEVGEFRDPSTAWQGKDGKWRVIIGAQNGDEGKIILYKSEDFVKWIVDPIPFFATDDTGVCECPDFFPVYINNTNGVDTTMENSSVRHVLKISYLRRRHDYYFIGKYVSDKEEFVPDVKYTGTWKELRFDYGKVYASKSFFDHAKNRRILWAWAEESDTSEDDIQKGWAGLQTIPRKFWLDKNGKQLMQWPIEELEKLRGKQINITGETLQSGSTLEVKGITASQADVEVLFELPNLQSAELLEPSEVDPQELCKEQYASRNGMIGPFGLQALASKDQTERTTISFRIYRAGDGFKCLMISDQTRSSLREDVEKTSYATIFDIDPNLKTISLRSLIDRSIIESFGDGGRACITSRAYPLFATDKDAHLFVFNDGSQSVVISQLNAWSMKQAQFGTESII* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0366 551 Pfam Glycosyl hydrolases family 32 C terminal 346 539 IPR013189 -
Mtr1g0366 551 ProSitePatterns Glycosyl hydrolases family 32 active site. 24 37 IPR018053 GO:0004553|GO:0005975
Mtr1g0366 551 SMART glyco_32 24 500 IPR001362 GO:0004553|GO:0005975
Mtr1g0366 551 CDD GH32_Fruct1-like 30 332 - -
Mtr1g0366 551 SUPERFAMILY Arabinanase/levansucrase/invertase 15 344 IPR023296 -
Mtr1g0366 551 Gene3D - 356 540 - -
Mtr1g0366 551 Pfam Glycosyl hydrolases family 32 N-terminal domain 24 343 IPR013148 -
Mtr1g0366 551 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 11 548 - -
Mtr1g0366 551 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 11 548 - -
Mtr1g0366 551 Gene3D Glycosyl hydrolase domain; family 43 28 355 IPR023296 -
Mtr1g0366 551 SUPERFAMILY Concanavalin A-like lectins/glucanases 343 542 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0366 Mtr-Chr1 4201205 4204492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0366 29 545 Glycoside Hydrolase AT1G55120 53.700 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0366 K01193 - gmx:100806220 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0366 1 4201205 4204492 Mtr1g0366 1 4201205 4204492 ECH