Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0365 ATGTACTATAAAGGAGTTTACCATTTATTCTACCAATATAACCCTGCTGCAGCAACATTTGGTCATGAGAAAATGGTATGGGGTCATTCTATATCAAATGATCTCATAAATTGGACTCATCTAAATGATGCTATTGTACCAACTATACCTGGTGACATAAACAGTTGTTGGTCAGGTTCAGCCACTATACTCCCAGGTGAAAAACCTGCTATGTTGTATACAGGAATTGATCAAAATAGACACCAAGTTCAAAATTTAGCCATGCCAAAGAATCTGTCTGATCCTTACTTAAGGGAATGGGAAAAACATCCTCAAAATCCTTTGATGACTCCACCTAGTGGAGTTGAAGTCGGTGAATTCCGAGATCCTTCAACTGCATGGCAAGGAAAGGATGGAAAATGGAGGGTAATTATTGGTGCTCAAAATGGAGATGAAGGAAAAATTATTCTTTACAAAAGTGAGGATTTTGTTAAGTGGATAGTGGATCCTATACCTTTCTTTGCAACAGATGATACCGGAGTTTGTGAATGTCCGGATTTTTTTACTGTGTATATCAATAGTACAAATGGGGTGGATACAACTATGGAAAATTCAAGTGTTAGACGTCTTAAAATAAGCTATTTCCGTAGACATCTTGACTTCTACTTTATTGGAAACTATGTATCTGATTCTGATCAGGAAAAATTTATTCCTGATGTAAATTATACAGGAACTTGCAAAGACTTAAGATTTGACTATGGCCTTTTTTATGCTTCAAAGTCATTTTTTGACTATGCTAAGAATAGGAGAATATTATGGGGATGGGTGGAGGAAAATGACTCTGAACAAGATGAGATTGATAAAGGATGGGCTGGTTTACAGACTATTCCAAGGAAGTTTTGGCTTGATGAAAGTGGGGAGAGATTAATGCAGTGGCCAATTGAAGAGTTAGAAAAACTTGGTGGCAATCAAATCAATATCACTGGAGAAACACTCCAAAGTGGATCAACTCTTGAAGTAAAAGGTATCACTGCATCACAGGCTGATGTGGAAGTTTTGTTTGGGCTACCTGATCTACAAAGTGCTGAGCTGCTAGAACCAAGTGAAACTAATCCTCAAGAACTCTGTAAAGAACAATATGCATCAAGAAAATGCATGATAGGGCCATTTGGTTTGCAAGCCTTAGCATCAAAAGACCAGACAGAGAAGACTACAATATCTTTCCGGATATATAGAGTCGCGGATCATTATAAATGTTTGATGATAAGTGACCAGACCAGGTCTTCATTGAGGCAGGATCTTAAGAAACTCATATATGCAACTATCTTTGACATAGATCCCAATCTCAAAACAATTTCACTCAGAAGCCTGATTGACCGGTCCATTATTGAGAGTTTTGGAGATGGAGGGAAAGCTTGCATAACAAATAGAGTTTATCCCTTATTGGCTATAGAGAAATATGCACATCTTTATGTATTCAACAATGGAAGCCAAAGTGTGGCTATTTCACAACTAAATGCTTGGAGCATGAAGCAAGCAGAGTTTAGAGTGGAAAACAGTATATAG 1545 0.3748 MYYKGVYHLFYQYNPAAATFGHEKMVWGHSISNDLINWTHLNDAIVPTIPGDINSCWSGSATILPGEKPAMLYTGIDQNRHQVQNLAMPKNLSDPYLREWEKHPQNPLMTPPSGVEVGEFRDPSTAWQGKDGKWRVIIGAQNGDEGKIILYKSEDFVKWIVDPIPFFATDDTGVCECPDFFTVYINSTNGVDTTMENSSVRRLKISYFRRHLDFYFIGNYVSDSDQEKFIPDVNYTGTCKDLRFDYGLFYASKSFFDYAKNRRILWGWVEENDSEQDEIDKGWAGLQTIPRKFWLDESGERLMQWPIEELEKLGGNQINITGETLQSGSTLEVKGITASQADVEVLFGLPDLQSAELLEPSETNPQELCKEQYASRKCMIGPFGLQALASKDQTEKTTISFRIYRVADHYKCLMISDQTRSSLRQDLKKLIYATIFDIDPNLKTISLRSLIDRSIIESFGDGGKACITNRVYPLLAIEKYAHLYVFNNGSQSVAISQLNAWSMKQAEFRVENSI* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0365 514 SUPERFAMILY Concanavalin A-like lectins/glucanases 306 505 IPR013320 -
Mtr1g0365 514 CDD GH32_Fruct1-like 1 295 - -
Mtr1g0365 514 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 306 IPR013148 -
Mtr1g0365 514 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 511 - -
Mtr1g0365 514 SMART glyco_32 1 463 IPR001362 GO:0004553|GO:0005975
Mtr1g0365 514 SUPERFAMILY Arabinanase/levansucrase/invertase 1 307 IPR023296 -
Mtr1g0365 514 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 1 511 - -
Mtr1g0365 514 Gene3D - 319 503 - -
Mtr1g0365 514 Gene3D Glycosyl hydrolase domain; family 43 1 318 IPR023296 -
Mtr1g0365 514 Pfam Glycosyl hydrolases family 32 C terminal 316 502 IPR013189 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0365 Mtr-Chr1 4192334 4195704 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0365 1 508 Glycoside Hydrolase AT3G13790 53.089 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0365 K01193 - mtr:MTR_1g015940 840.491