Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0345 ATGAATCTCTGGTGCTGTTTATGGTTCAATCGAGAAGAAGAAGACAAAGAAGCTGTAATTCACGACGAAAGGTGTCAACTTGTTGAACCTGGTATGAACAACAACGACGACGAAGATATTTTCGGAAACGTTAATTCTGATGAAGATGAAGAAATTGAAGCTGGGAATTATGAGGCCAATTTTCGGAGAGAGTTTTTGATTGATGGGTTTGATTCGTGGCCTGCTGTACGGCGCTCGATCGGAGAAAGTAGCTCTGTTAGCGCCGCTGTAATCCCGAATTCCGGTCCGGAAAGTCCTGTTGCTGATGAGAACCGTGATTCGTCTCATAAGCGTGCTAAGTTCTACAATGAGTGTAACTTTGATGATCTGGCGTCTACGAGCAAAGTGAACTACTCTATGGATTATGCAGATTTTGACAGTTCTATTCAGCCTAGTAATAATAGTTGTTATGGCGATTTTGCGTTGGTGTGTAGTGGTGAGGATGGTAACGGTGTAGAAGACGGTGGAGGGAATGATGATGACAATTCAGAACTTGAAGATCAAGAGATTGTTAGGATGGACCTTACAGATGATCTATTGCATATGGTCTTCTCATTTCTGGATCAGAACAATCTCTGCAGAGCTGCCAGAGTTTGTAAGCAGTGGCGGGCTGCCAGTACACATGAAGATTTTTGGAAGAGTTTGAATTTTGAAAATCGGGACATATCTGAAGAACAATTTGAGGACATGTGTAGGCGTTATCCGAATGCTACAGCATTGAGCATATCAGGACCTTCTATTTATTTGCTGGTCATGAAGGCAATCTCTTTGTTAAGGAATCTTGAGGTTTTAACATTGGGAAGAGGACAGATAGGGGATGCATTTTTTCTTGCTCTACCTGATTGTACTATGTTGAGAGAATTGCATATCAATGATTCGACACTTGGAAATAGTATTCAAGAGATATCTATCGTCCATGAGAGACTGTGTCATCTTGAATTAACAAAATGTCGTGTCATGCGAATACAAGTCAGGTGCCCGCAACTTAAAACCATGTCATTGAAGCGCAGTAACATGGCACAAGTTGTGCTTAATTGCCCTCTTCTGCTTGAACTTGATATGGGTTCTTGCCACAAACTTCCTGATGCTGCTATTCGTGCTGCTGCAACTTCATGCCCTCAACTAGTGAAACTGGACATGCGTAATTGTTCTTGTGTCAGCGATGAAACACTGCGTGAAATAGCACAACATTGTCCTAATCTTGGTTTTCTTGATGCATCATACTGCCCAAACATATCTTTGGAGTCTGTTCGACTCCCAATGTTGACCATTCTAAGACTTCATAGCTGTGAGGGCATCACTTCTGCGTCAATGGCTGCAATAGCTCACAGTTCTATGTTGGAGGTTTTGGAGCTTGACAATTGCAGTCTATTGACTTCGGTGTCGTTGGATCTTCCACGTTTGCAGAATATTAGATTGGTGTACTGTCGCAAATTAGCAGATTTGAATTTGAGAGCTATATCGCTTTCTTCTATACAAGTGTCTAACTGCTCTGTACTCCACCGGATCAATATCACTTCAAATTCACTTCAAAAATTAGCACTGCAAAAGCAGGATAGCTTAACTACATTAGCGCTGCAATGCCAATCTTTACAAGAAGTGGACCTCTCTGAGTGTGAATCATTGACAAACACTGTATGTGATGTTTTTAGTGACGGTGGAGGATGTCCCATGTTGAAATCACTAGTTCTTGATAATTGTGAGAGCTTGACTTCAGTTCGGTTCATCAGCACCTCGTTAGTCAGTCTCTCCCTTGGTGGTTGCCGAGCAGTTACTACTCTTGAGCTAACATGCCCTTATCTTGAGAAGGTCATATTGGATGGTTGTGATCATTTGGAAAATGCATCATTTTGCCCTGTTGGTCTTCGATCTCTCAATTTAGGAATATGCCCAAAATTAAACATACTTCGCATTGAAGCGATGTTAATGGTCTCACTTGAGTTGAAAGGATGTGGTGGACTGTCTGAAGCATCCCTTAATTGTCCTCTCTTGACATCACTGGATGCTTCCTTTTGCAGCCAACTCACTGATGACTGCTTGTCTGCAACAACCCGTGCCTGTCCACTGATTGAGTCATTAATATTAATGTCCTGCCCATCGATTGGGTTAGATGGACTCTGTTCCCTGCATTGGCTCCCAAATTTAGCTCTGCTTGATTTATCATACACTTTCCTGGTGACTCTGCAGCCTGTTTTTGATTCTTGTAAACAACTAAAGGTACTAAAGTTGCAGGCATGCAAATATCTCACCGACTCATCACTTGAACCTCTTTACAAGGGGGGTGCTTTACCAGCTCTTCAGGAGTTGGATTTGTCTTATGGAACTTTGTGTCAGAAAGCCATAGAAGAGCTTCTTTCTTGTTGCACTCACCTTACACGTGTGAGTTTAAACGGATGTGTGAATATGCATGATTTAAACTGGGGGCACAGTCAAGGGAAGTTTCCTGAGTTACCTGGCATAAGCATCCTATCCATCGCAAGTTCCTACGAAAACAATCATGTGTCAAGTGAGCAACCCATCCGATTACTTCAGAACCTCAACTGTGTGGGTTGTCCAAATATTAGGAAGGTTTTCATTCCATCAACAGCACACTGTTCCCATTTATTATTTTTAAACCTTTCACTGTCGGCTAATTTGAAGGAAGTTGATGTAGCTTGTCTCAATCTATGCTGGCTTAATCTAAGCAACTGTTCCTCATTGGAAGTTTTGAAGCTAGAGTGTCCGAGATTGACCAATCTATTCCTTCAGGCGTGCAATATTGATGAGGAGGCTGTTGAAGCTGCTATATCAAAATGTACTATGTTGGAGACTCTTGATGTTCGCTTCTGTCCTAAGATAAGCTCAGCGAGTATGGGAAAATTTCGTGCAGCATGTTCTGGTTTGAAGCGTATATACAGCAGCTTGTCAACTTCATCAGCATGA 2961 0.4205 MNLWCCLWFNREEEDKEAVIHDERCQLVEPGMNNNDDEDIFGNVNSDEDEEIEAGNYEANFRREFLIDGFDSWPAVRRSIGESSSVSAAVIPNSGPESPVADENRDSSHKRAKFYNECNFDDLASTSKVNYSMDYADFDSSIQPSNNSCYGDFALVCSGEDGNGVEDGGGNDDDNSELEDQEIVRMDLTDDLLHMVFSFLDQNNLCRAARVCKQWRAASTHEDFWKSLNFENRDISEEQFEDMCRRYPNATALSISGPSIYLLVMKAISLLRNLEVLTLGRGQIGDAFFLALPDCTMLRELHINDSTLGNSIQEISIVHERLCHLELTKCRVMRIQVRCPQLKTMSLKRSNMAQVVLNCPLLLELDMGSCHKLPDAAIRAAATSCPQLVKLDMRNCSCVSDETLREIAQHCPNLGFLDASYCPNISLESVRLPMLTILRLHSCEGITSASMAAIAHSSMLEVLELDNCSLLTSVSLDLPRLQNIRLVYCRKLADLNLRAISLSSIQVSNCSVLHRINITSNSLQKLALQKQDSLTTLALQCQSLQEVDLSECESLTNTVCDVFSDGGGCPMLKSLVLDNCESLTSVRFISTSLVSLSLGGCRAVTTLELTCPYLEKVILDGCDHLENASFCPVGLRSLNLGICPKLNILRIEAMLMVSLELKGCGGLSEASLNCPLLTSLDASFCSQLTDDCLSATTRACPLIESLILMSCPSIGLDGLCSLHWLPNLALLDLSYTFLVTLQPVFDSCKQLKVLKLQACKYLTDSSLEPLYKGGALPALQELDLSYGTLCQKAIEELLSCCTHLTRVSLNGCVNMHDLNWGHSQGKFPELPGISILSIASSYENNHVSSEQPIRLLQNLNCVGCPNIRKVFIPSTAHCSHLLFLNLSLSANLKEVDVACLNLCWLNLSNCSSLEVLKLECPRLTNLFLQACNIDEEAVEAAISKCTMLETLDVRFCPKISSASMGKFRAACSGLKRIYSSLSTSSA* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0345 986 SMART LRR_CC_2 920 944 IPR006553 -
Mtr1g0345 986 SMART LRR_CC_2 541 566 IPR006553 -
Mtr1g0345 986 SMART LRR_CC_2 945 970 IPR006553 -
Mtr1g0345 986 SMART LRR_CC_2 569 599 IPR006553 -
Mtr1g0345 986 SMART LRR_CC_2 432 457 IPR006553 -
Mtr1g0345 986 SMART LRR_CC_2 700 725 IPR006553 -
Mtr1g0345 986 SMART LRR_CC_2 674 699 IPR006553 -
Mtr1g0345 986 SMART LRR_CC_2 611 636 IPR006553 -
Mtr1g0345 986 SMART LRR_CC_2 385 410 IPR006553 -
Mtr1g0345 986 SMART LRR_CC_2 478 503 IPR006553 -
Mtr1g0345 986 SMART LRR_CC_2 748 773 IPR006553 -
Mtr1g0345 986 SMART LRR_CC_2 801 841 IPR006553 -
Mtr1g0345 986 SMART LRR_CC_2 359 384 IPR006553 -
Mtr1g0345 986 Gene3D Ribonuclease Inhibitor 740 830 IPR032675 -
Mtr1g0345 986 PANTHER OS10G0396666 PROTEIN 102 945 - -
Mtr1g0345 986 Gene3D - 185 228 - -
Mtr1g0345 986 SUPERFAMILY F-box domain 187 218 IPR036047 GO:0005515
Mtr1g0345 986 PANTHER OS10G0396666 PROTEIN 102 945 IPR044703 GO:0010252|GO:1905393
Mtr1g0345 986 Gene3D Ribonuclease Inhibitor 311 431 IPR032675 -
Mtr1g0345 986 Gene3D Ribonuclease Inhibitor 846 984 IPR032675 -
Mtr1g0345 986 Gene3D Ribonuclease Inhibitor 590 739 IPR032675 -
Mtr1g0345 986 Gene3D Ribonuclease Inhibitor 432 589 IPR032675 -
Mtr1g0345 986 ProSiteProfiles F-box domain profile. 182 228 IPR001810 GO:0005515
Mtr1g0345 986 SUPERFAMILY RNI-like 432 707 - -
Mtr1g0345 986 SMART fbox_2 188 228 IPR001810 GO:0005515
Mtr1g0345 986 Pfam F-box-like 190 230 IPR001810 GO:0005515
Mtr1g0345 986 MobiDBLite consensus disorder prediction 84 107 - -
Mtr1g0345 986 SUPERFAMILY RNI-like 665 979 - -
Mtr1g0345 986 SUPERFAMILY RNI-like 209 475 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0345 - - gmx:100782842 1445.64