Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0341 ATGCGAGGTGCATTTTCAACAAATAAAACCATGGGAGAGGCACCAGAAATGTTTTACGTTAACGGGTTTGCAAAGGTTGTCCCTGAAGTTCAACCAAACCATGTCAACAACGTTGATGATTCTTCCACATGGTATGAGGAAATCATCGATGATGATCTCAAATGGTCCTTTAAACTCAACAGTGTGCTTCATAAAGCTATTAGTGAATACCAGGACATTGCTCTCTTGGATACAAAGCGTTTTGGAAAGGCGTTGATGCTTGATGGAAAGATGCAGAGTTCTGAAGCAGATGAATTCATTTATCATGAATGCTTGATTCATCCCTCTCTTTTATGTCATTCAAACCCCAAGACAGTGTTTATAATGGGAGGTGGTGAAGGTTCAGCAGCTAGAGAAGCTCTCAAGCACAAGTCAATGGAGAAAGTAGTTATGTGCGATATTGACAAGGAGGTGGTGGATTTCTGCAGAAAATACCTGGTTGCAAATAAGGAGGCATTTGCTGACAAGAAGCTCGACCTTGTCATCAATTGTGCCAAGGCTGAATTAGAGAAAAGAAAGGAGAAGTTTGATATCATTGTTGGAGATTTGGCTGACCCACTTGAAGATGGTCCTTGCTATCAGCTCTACACTAAGTCCTTCTATGAGAAAGTTGTGAAGCCTAAACTCACTGAGAATGGCATTTTTGTGACCCAGGCTGGACCAGCAGGAATCTTTTCACACAAAGAGGTCTTCACCTCTATACACAACACCATAAAACAGGTCTTCAAATATGTGGTGGCATACGGGACTCATGTACCATCATTTGCTGATTCATGGGGATGGGTTATGGCTTCAGACCAACCAATATTGATTGATGCTGTGGAAATGGACAAAAGAATTGAAGAAAGAATAAAAGGAAAATTGCTCTACCTAGATGGTGCTTGGTTCCATTCATCTACCATCATGAATAAGGCCGTGTCCAAATCGCTGAAGAATGAAACTCATGTGTACACTGAAGATAATGCTAGATTTATTCCTGGTCATGGCATAGCATGTCGTCCCTAA 1044 0.4128 MRGAFSTNKTMGEAPEMFYVNGFAKVVPEVQPNHVNNVDDSSTWYEEIIDDDLKWSFKLNSVLHKAISEYQDIALLDTKRFGKALMLDGKMQSSEADEFIYHECLIHPSLLCHSNPKTVFIMGGGEGSAAREALKHKSMEKVVMCDIDKEVVDFCRKYLVANKEAFADKKLDLVINCAKAELEKRKEKFDIIVGDLADPLEDGPCYQLYTKSFYEKVVKPKLTENGIFVTQAGPAGIFSHKEVFTSIHNTIKQVFKYVVAYGTHVPSFADSWGWVMASDQPILIDAVEMDKRIEERIKGKLLYLDGAWFHSSTIMNKAVSKSLKNETHVYTEDNARFIPGHGIACRP* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0341 347 Pfam Spermine/spermidine synthase domain 98 274 - -
Mtr1g0341 347 Gene3D Vaccinia Virus protein VP39 95 345 IPR029063 -
Mtr1g0341 347 Gene3D Spermidine synthase, tetramerisation domain 42 94 IPR037163 -
Mtr1g0341 347 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 42 279 IPR030374 -
Mtr1g0341 347 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 11 346 - -
Mtr1g0341 347 Hamap Polyamine aminopropyltransferase [speE]. 43 324 IPR001045 GO:0003824
Mtr1g0341 347 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 42 323 IPR029063 -
Mtr1g0341 347 Pfam Spermidine synthase tetramerisation domain 44 95 IPR035246 -
Mtr1g0341 347 CDD AdoMet_MTases 123 231 - -
Mtr1g0341 347 PANTHER BNAA02G04280D PROTEIN 11 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0341 Mtr-Chr1 3830434 3834633 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0341 K18787 - gmx:100815510 582.793