Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0339 ATGTACAAGTTTGAGAAGAGATCAACAATCCACGACAGGTTCATAAACCCTTCATTCTCTTCCACCCTCTTAGACCAAATTTACCGTTCCATCGACGAAGGAGAAACAAAATTAACCACCGAAACAACCAAATTTTACAGAGAACAAAAACCAACGGTTATAAACAAACCAACAACCGACAGAAAATATTATAACTACGAACCAAAAACTGAAAAACTTGTCACTGTCGTGAAAGAAACCAACAACAATCGAAAATCAAATCAACATGATCATGACCAAGATGCTCTGTTCTTCAGTTCAACCTCAATTTCTTCGGATTCTAGCTCCAGTGGATTCTCCTCCTCCGACACAGATTCATTATACAGAACAAAATCACGTTCCTCGTCGTGCTTTGTTCCACCGAGGCCAAAACCGGTGAGAACAAGCACGTCGGCATCATTTAGGTTTGAAAAAGAGAAACATGGGAATCATGTTTTCGATGATTTTTGTCGAAGTTCAGAAACCAAACAAGGCACAGAAACTCGCGGCGAGGAAGTAATTTTAATAAAGAACAAATCAAGAGCCGTTAAGATTTACAATAACTTGAAGAAAGTGAAGCAACCGATTTCGCCAGGTGGAAAACTCACGAGTTTCCTCAACTCTCTATTTGTTAATAGTAACAATGAGAAGAAAATGAAGACTGAGAAACCAACAAAGACGAAGAAGCAGATGAACACGTGGGAGACTCATGAGGGAAAAGTAGCTTCCACGTGTTCATCTGCTTCTTCGTTTTCGCGGTCTTGTTTGAGCAAAACAGCGTCATTTTGTGGTAGAAATGATTACAAAACTGTTGGTTTTTGTGGAGTGGAAGAGGGTAGAGCTAAGGTGGAGGAAGCTACTAGAAAGTTTTTGAATGAGTACCATAGCCGTAACAAGAAGAAGAAGAAGGACGATTTAGTTTTATTAAAGGATTTGTGTATTAATCAAAATGAAGAAGAGGATGAAGATGATGATGATGTGGCAAGTTGTGCAAGTTCTGATCTTTTTGAGTTGGATCATTTGAGTGTGTTTGGAGATAGTAGGTATTGTGAGGAGCTTCCTGTGTATGGAACTACCCGTGTTAGTTAA 1107 0.3921 MYKFEKRSTIHDRFINPSFSSTLLDQIYRSIDEGETKLTTETTKFYREQKPTVINKPTTDRKYYNYEPKTEKLVTVVKETNNNRKSNQHDHDQDALFFSSTSISSDSSSSGFSSSDTDSLYRTKSRSSSCFVPPRPKPVRTSTSASFRFEKEKHGNHVFDDFCRSSETKQGTETRGEEVILIKNKSRAVKIYNNLKKVKQPISPGGKLTSFLNSLFVNSNNEKKMKTEKPTKTKKQMNTWETHEGKVASTCSSASSFSRSCLSKTASFCGRNDYKTVGFCGVEEGRAKVEEATRKFLNEYHSRNKKKKKDDLVLLKDLCINQNEEEDEDDDDVASCASSDLFELDHLSVFGDSRYCEELPVYGTTRVS* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0339 368 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 367 IPR039621 GO:0009734
Mtr1g0339 368 MobiDBLite consensus disorder prediction 101 143 - -
Mtr1g0339 368 PANTHER PROTEIN BIG GRAIN 1-LIKE B 1 367 - -
Mtr1g0339 368 MobiDBLite consensus disorder prediction 101 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0339 Mtr-Chr1 3823196 3824645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0339 - - mtr:MTR_1g015275 660.218