Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0335 ATGATGATGAAACCAAACTTTGAGTCTCAAAATAAAGATGTTGGTGAAACTGAAACTGATTCAAATATTGGTCATGAAGAATTACTTCGTGACATTGAAGAATTAAGCAAAGCTCTTTACTTGGACAATACCCCTTTTAAGCCTTCTACCCTCTCTGCTGAAAAATCCCGTTCGTCAAAATCTCAACTTAACTCAACCCCGAGATTTGTAAGTGAGGATCTGTTGATAGGGGACAAGAAATTGTCTTCAAAATGGAATTGGAAGAAGCCCTTGAAAGTTTTAACAAATATTGGTTCGCAGAAGTTTGTTTGTTGCTTTAATCTTCATGTTCATTCGATTGAGGGACTGCCTTTGAGTTTCGACGGCGTTAGGTTAAGTGTGCATTGGAAAAGGAAAAATAGCATTTTGCAGACCTGCCCTTCAAGGGTATTGGACGGTTCTGCGGAGTTTGATGAAACTTTGGTACATAGATGTTCGGTTTATGGTGGTCGTGTGGTGTCTGGTCGTTCTGTTAAGTATGAATCCAAGCGATTCTTGATTTATGCTTCTGTTGTCGGGGAACCTGAACATGACATTGGGAAACATCAGGTTGATCTCACTAGGCTTTTGCCACGGAGTTTAGAAGAGTTACGGGGTGATAAAAGTTCAGGGAAATGGAGTACAAGTTTTAGGTTGGTTGGAAAAGCTTTAGGAGCTAGATTAAATGTTAGTTTTGGTTATCAAGTAATGAAGGATGATTTAATGAGATTTGGTGCTAGTACTGGGAATGTTGTTAACCTTGTTAACTTGAAGACAAATACAAGCATCCCCGACAATGTTGCCGGTTTTAGTTCTAACAATAGGGATGTCATAAAGCTTCGGCCAACTCAGAATGACGTGGTGTTATCGAATGAAGCAGTGATGAATTCTGGCTCAGGTTTTTCTAAATCAATCACTTTCCTATATCAAAAGCTTGATGAGGAGAACTTCAATAATTCAGCATGCGCAGACTCAGAGTCATCTCAAGGATCAAATCTAAATGTGTCTGATGACACTGAATTTTCCATCAGTGAACAAGGAGTAGAAACATCAGAAGAGGACTCGTTCGAATTTGATCAAACAAGAATTCAAATAGTTGACATGTCCACAGTTGAAATCATTGATGTCGATGAGATTATTAAGGATGATGACACGTTTGTTGACAATAACGCAAGCTGTGATTCACTGGATACCATATGTTCTAGGAATGTGAATTGGGATATAGCAGATAACAGCAAGCATAGATTCAGTATTTCATGTGTCGATCTACTATCCATGAAGATTAAGGATTCAGTTTCTGAGACGTCAAAGTTTCTTGACAAAGAAGAACACTACTTTAGTGTTAAATCAAATGATAAAGCACATAAAAAGTCACATAGCTTGGATGATGTCATCGACTCTGTCGCGAGTGATTTACCATCCATGAAGATTAAGGATTCAGTTTCTGAGACATCGGAGTTTCTTGACAAAGAAGAACACTACTTAAGTGCTAAATCAAATGATAAAGCACATAAAAGGTCACATAGCTTGGATGATGTCATCGACTCTGTCGCGAGTGATTTCTTAAAGACGCTGGCATTGGAGAGCGGTTCATTTCGCTCAAGCTGTGACGGTGATCCCATGTCTCCTAGAGAGAAACTTTTAAGACAGTTTGAAAATGAGGCTCTAGCTTCAGGTAACTTCGCTTTTGATTTTAATGCGAACGAGGAGGAATTGGGGCAATATACACTTGAACATAACTATGAGGATTATGACGTGGATTCTGATTTATCTTTAATTATTGGTGCCGCGGAAGAGGAGTATGAAAGGGAAGATCAATCATTAATGCAGAGAAGGAAGGCCAAAATTCTTGAAGATCTTGAGACTGATACATTAATGCAACAATGGGGTTTAGATGAGAGGGACTTTGAAAATTCTCCAAGAACCTGGTCTGGTGGATTTGGAAGTCCAATTGAAATATCCGATGAAGAACCATCCATATTACCTTCGATTGGGGAAGGGCTTGGTTCGTTTTTTCAAACTAGGAGTGGAGGCTTTTTGAGGTCCATGTGTCCTTCCCTCTTCAGAAATGCTAAGAATTGTGGGAGCCTCATCATTCAGGCTTCTAATCCAGTCGTTCTACCTGCAAAAATAGGTAACGATATATTGGATATACTTCTGTACATGGCATCTGCTAGAGTTGAAGAGCTGTGCAATTATATCTCTAAATCAATGCCTTTGCAAGATATCACTGGAAAATCCATTAAGCATATTGTGTCGGATGCTAAGACCAACACGGAAGCTTCTGGAAGGAAGGGATCATGGCAGCATAATTTGTTTGAAGAATTTCCATGTAGTTATTTAACAGATAAAGACAAATGCTTGGACTCTTTGTCTCTAGAAACTATAGCTCCTATGACTATTAACAAGATCGAATCTCTTTTAATAGAAGGGTTGAGAATTCAGTCTAGCCTGTCAAATGAAGATGCACCATCATGCATTCGTGGAGAAATCAACAATGATCTTGATGGTTTGATGGATCTGTCGGTTACGTTGGATCAATGGTTGAGACTTGATTCTGGCATCATCCAAGGAGAACATAATTTGGAACAAATTTTGAAGATTCTTAAAGCACACAATTCTAAAATCACAGAATTATATAATGAAGGGTTGGGAAATGGCATCGATAAGGAGAAAATAGATGGCAGAAAGCGCTGTTATTTGGGAGAGCACGCAACAATGGCTTTTATGATCCAGCACAGAGATCCTCTAAGAAACTATGAAGCAGTTGGAGTTCCAATGCTGGTTTTAACTCAGGCAGAAAGAGTTGACATACATGAAATGGAGAAAGACTGCGACAATTTTGTTGAGAATGAAGATATAGATAAAGAACCACCTCAATCTAGATTCAAAATCAAGGAGATTCATATTGCAGGTGTCCTTACCAAAAATGGTGGTAACCGACAAGTTTGGGGCACTGCGTCTCAGCAACAATCCGGGTTGCGTTGGTTGCTTTCCAGTGGCATGTGTAATACTGTCAAACACTCTTCTTCAAAATCGAAGTCGATTGTTGTTAGATCATCTTCACTGTTTGCCAACAAATTGATGAATCAAGATATCTTGTGGAGCATCTCTTGTGTTAATAGTAACATAGAGACTAATGCACACATTAGGAATCCTGATATCATGTTCCCAAAGTGA 3198 0.3896 MMMKPNFESQNKDVGETETDSNIGHEELLRDIEELSKALYLDNTPFKPSTLSAEKSRSSKSQLNSTPRFVSEDLLIGDKKLSSKWNWKKPLKVLTNIGSQKFVCCFNLHVHSIEGLPLSFDGVRLSVHWKRKNSILQTCPSRVLDGSAEFDETLVHRCSVYGGRVVSGRSVKYESKRFLIYASVVGEPEHDIGKHQVDLTRLLPRSLEELRGDKSSGKWSTSFRLVGKALGARLNVSFGYQVMKDDLMRFGASTGNVVNLVNLKTNTSIPDNVAGFSSNNRDVIKLRPTQNDVVLSNEAVMNSGSGFSKSITFLYQKLDEENFNNSACADSESSQGSNLNVSDDTEFSISEQGVETSEEDSFEFDQTRIQIVDMSTVEIIDVDEIIKDDDTFVDNNASCDSLDTICSRNVNWDIADNSKHRFSISCVDLLSMKIKDSVSETSKFLDKEEHYFSVKSNDKAHKKSHSLDDVIDSVASDLPSMKIKDSVSETSEFLDKEEHYLSAKSNDKAHKRSHSLDDVIDSVASDFLKTLALESGSFRSSCDGDPMSPREKLLRQFENEALASGNFAFDFNANEEELGQYTLEHNYEDYDVDSDLSLIIGAAEEEYEREDQSLMQRRKAKILEDLETDTLMQQWGLDERDFENSPRTWSGGFGSPIEISDEEPSILPSIGEGLGSFFQTRSGGFLRSMCPSLFRNAKNCGSLIIQASNPVVLPAKIGNDILDILLYMASARVEELCNYISKSMPLQDITGKSIKHIVSDAKTNTEASGRKGSWQHNLFEEFPCSYLTDKDKCLDSLSLETIAPMTINKIESLLIEGLRIQSSLSNEDAPSCIRGEINNDLDGLMDLSVTLDQWLRLDSGIIQGEHNLEQILKILKAHNSKITELYNEGLGNGIDKEKIDGRKRCYLGEHATMAFMIQHRDPLRNYEAVGVPMLVLTQAERVDIHEMEKDCDNFVENEDIDKEPPQSRFKIKEIHIAGVLTKNGGNRQVWGTASQQQSGLRWLLSSGMCNTVKHSSSKSKSIVVRSSSLFANKLMNQDILWSISCVNSNIETNAHIRNPDIMFPK* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0335 1065 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 836 1065 IPR039614 -
Mtr1g0335 1065 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 3 478 IPR039614 -
Mtr1g0335 1065 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 485 834 IPR039614 -
Mtr1g0335 1065 ProSiteProfiles C2 NT-type domain profile. 94 242 IPR019448 -
Mtr1g0335 1065 MobiDBLite consensus disorder prediction 326 355 - -
Mtr1g0335 1065 MobiDBLite consensus disorder prediction 326 360 - -
Mtr1g0335 1065 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 2 836 1065 IPR039823 -
Mtr1g0335 1065 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 2 485 834 IPR039823 -
Mtr1g0335 1065 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 2 3 478 IPR039823 -
Mtr1g0335 1065 MobiDBLite consensus disorder prediction 1 23 - -
Mtr1g0335 1065 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 99 244 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0335 Mtr-Chr1 3788416 3792470 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0335 - - mtr:MTR_1g015120 2014.96