Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0325 ATGAGTTTATCCAAGAAAGGAGGATCCCCGACAGACACAAAACTGAGCTCACCAAACAAGGCAACCTCATTGAATCCGAATGCAGCAGAGTTTATTCCCTTTTCACTCAGATCACTGCCGTCTGGAAGTACTAGCTCGGTAGATGCAACAACAAGGCTTACAACTGCTGGTTCTCTCGGGAAAGCAGTTTTAGATCGATCGGAATCATCCATTTCAAATAATTCTGATGACGAGGCCCACAATTACTGGCGTTGTCAACTTCCAGATGATATCACACCTGATTTCAAGGTCATTGAAGAAGAAGAACCCCAAGGTCTTAACAACCTCTCATTCGCAGGCTTATCTATAAATGACGATAATGAATCGTCGATGTTTTCTTCTGCTAAGGGAAGCAGATATATACTAAACGAGCAGCAGGAATTACCTCAACACCACCTTAATGGAAATACATTTGCCGATAAGTTAAGGTTTTCCAATTCAACATACCGGGAAGAACCATCTTCGGCAAGCTTTTTGAATTCATTAGCAAAGCCTTGGGAAAGACCAGTTGGGAATAACAACCTCCATGTTAGCAGTGGTCAAGAGGCACTTGCCTATGATGACAATGCTAGGCTTGGATTCTTAAACGATAACAACCTCCATGTTGGCGGTGGTCAAGAGGCACTTGCCTATGATGACAATGCTAGGCATGGATTTTTAAATGATGTTTTGACCGAGAATGCTATTGTGGATGAGACTGATTTTAACCCTTTGGAATTTTTAGCTTCTCTATTCCCTGGTTTTGCGTCAGAAAGCCTTGCTGAAGTGTTCTTTGCCAATGGATGTGATTTACATCTGACCATTGAGATGCTCACTCAGTTAGAGATTCAAGTTGATAGTAATTTCATCCAGAACCCAAGCCCAAAGACTCTGTCATCTCCCAATCTGACTCCAATGGACTTTCCAGCACTTGCTCCAACAAACGGCCAGACTACTACTGCAAAATATGCTGCAGACAATGTTCAACAAAGTGGCAGTCCTTACTTACCGTCTGGCAAAGACTTGCTCATGTTCAAATCGAGCTCTTCTATTCCGACTAGAGGTGCTACCGACTTCGCTTCAGCTGTCAGGAAATTAGCTTCTCAGGATTCTGGAATATGGAAGTATGATAGAAATGGTTCTGGTGATGCTTCCACCGGATCAAGTAGGAGTTTAAATGTTCTAGCTAGTGCCTACAATGGCGGACAGGGGAGAAATAACTTTGGTGATAGGTTACAAAACCGTGGATCTGCTCGGCCAGCGCCTGTCTGGCTTGAAACCGGTGACGCTGTTGCAAATATGTATTCTGAACTTCGGGAGGAGGCTCGTGATCATGCACGCTTACGTAATGCATATTTTGAGCAGGCACGACAAGCCTACCTTATTGGTAATAAGGCCCTTGCAAAGGAGCTAAGTGCTAAAGGGCAACTGCATAACATGCATATGAAAGAAGCTCATGGGAAAGCTCAAGAATCTATTTACCGCCAGAGGAACCCTGTTGGTCCAGAGATGGTTAATGGAAGAGGACATGAGAGAATGATAGACTTGCATGGACTCCATGTAAGTGAAGCGATTCACGTGCTGAAACACGAACTGGGTGTGCTAAGAAGCACAGCCAGAGCTGCGGAGCAGCGTTTGCAGGTTTATATCTGTGTTGGTACCGGTCATCATACCAGAGGTTCCCGCACCCCTGCAAGACTTCCGATAGCTGTACAGCGTTATCTACTCGAAGAAGAGGGTCTTGATTTCACAGAACCACAGCCAGGCCTTATTCGTGTTGTGTTATATTGA 1809 0.4456 MSLSKKGGSPTDTKLSSPNKATSLNPNAAEFIPFSLRSLPSGSTSSVDATTRLTTAGSLGKAVLDRSESSISNNSDDEAHNYWRCQLPDDITPDFKVIEEEEPQGLNNLSFAGLSINDDNESSMFSSAKGSRYILNEQQELPQHHLNGNTFADKLRFSNSTYREEPSSASFLNSLAKPWERPVGNNNLHVSSGQEALAYDDNARLGFLNDNNLHVGGGQEALAYDDNARHGFLNDVLTENAIVDETDFNPLEFLASLFPGFASESLAEVFFANGCDLHLTIEMLTQLEIQVDSNFIQNPSPKTLSSPNLTPMDFPALAPTNGQTTTAKYAADNVQQSGSPYLPSGKDLLMFKSSSSIPTRGATDFASAVRKLASQDSGIWKYDRNGSGDASTGSSRSLNVLASAYNGGQGRNNFGDRLQNRGSARPAPVWLETGDAVANMYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSAKGQLHNMHMKEAHGKAQESIYRQRNPVGPEMVNGRGHERMIDLHGLHVSEAIHVLKHELGVLRSTARAAEQRLQVYICVGTGHHTRGSRTPARLPIAVQRYLLEEEGLDFTEPQPGLIRVVLY* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0325 602 Pfam Domain of unknown function (DUF1771) 441 504 IPR013899 -
Mtr1g0325 602 Gene3D - 488 602 IPR036063 -
Mtr1g0325 602 MobiDBLite consensus disorder prediction 1 26 - -
Mtr1g0325 602 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 210 602 - -
Mtr1g0325 602 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 211 - -
Mtr1g0325 602 SMART SMR_2 517 602 IPR002625 -
Mtr1g0325 602 CDD CUE_CID7_like 249 290 IPR041806 -
Mtr1g0325 602 SMART DUF1771_2 440 505 IPR013899 -
Mtr1g0325 602 SUPERFAMILY SMR domain-like 518 601 IPR036063 -
Mtr1g0325 602 ProSiteProfiles Smr domain profile. 520 602 IPR002625 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0325 - - gmx:100796128 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0325 1 3663016 3669137 Mtr1g0325 1 3663016 3669137 ECH