Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0301 ATGTATAATCCAGCTACGCGTGTTACAAAAGAACCAAATGCGGTTCTTGAATTAGGTTCACGAATTGGTCGATTCACACTCGATACGTCGTCGTTTCTAAACCTAACTTCAGAAGCATGTTCACCAGCTTCACTTCTTTCTAATTATCTTTACTTCAACAACCTCACACGTGTGGCATCATCATCAAAACGCACCGTTTCACTCAGTTTAAACAATAGCGGTGGTGGTTATAAGTTTAGGAATATTCTTCATGATTTTAATAGAGCTGTTAGGGTTCATTGTGAGAGGATGCCGATTGGATTCGCTTCGTTGAGAGTAGGTGATGGAGGTGACGGTGGTGGTGGTGTTGGTGGAGGTGAGGGTGAGGGGAATGATGTTGGTGGAAATGGGAATGGGGTTGGTGTGGAAGATGAAGGATTGGGATTGAAGAGTGGTGAGGGGAAGAAAGCGAAGAAGGTTTTGATTTTGATGAGTGATACTGGTGGTCATCGTGCTTCTGCTGAAGCGATTAAAGCTGCTTTTTATCAAGAATACGGCGATGATTATCAGGTATTTATTACTGATTTGTGGTCTGAGCACACACCTTGGCCGTTCAATCAAATTCCCAAAAGCTATAGCTTTTTGGTGAAACATGGACCGTTGTGGAGGATGACCTACTATGGAACTGCCCCACGTCTAGTTCATCAGTCCAATTTTGCTGCAACTTCAACATTCATAGCTCGTGAGGTTGCTAAAGGGTTAATGAAGTATCAACCTGATATAATAATCAGTGTGCATCCACTGATGCAACATGTTGCCCTTCGCATTTTGAGGTCAAGGGGTCTTTTAGATAAGATTGTTTTTACCACAGTTATTACAGATTTGAGCACGTGCCATCCAACATGGTTTCACAAGCTTGTAACTAGATGTTATTGTCCAACTACAGATGTTGCCAAAAGAGCAATGAAAGCTGGACTCCAACAAACCCAAATAAAGATTTACGGCCTACCTGTTAGACCGTCCTTTATAAAGCCTGTTCGGCCAAAGGATGAACTGAGGAGAGATTTAGGGATGGATGAGGATCTTCCTGCTGTATTATTGATGGGGGGTGGTGAAGGCATGGGTCCCATTGAAGCTACTGCTTGGGCACTTGGAGATTTATTAAATGACGAGGGGGTTCCCACAGGTCAGATTCTTGTGATCTGTGGTCGCAATAAGAAGCTTGCTAACAAACTCAGTTCTATTGATTGGAAGATTCCAGTGAAGGTCAAGGGGTTCGTTACCAAAATTGAAGAATGCATGGGAGCCTGTGATTGCATTATTACAAAGGCAGGCCCAGGGACAATTGCAGAGGCCATGATTCGAGGCCTACCTATTATTTTAAATGATTACATTGCCGGGTTGGAAGCTGGCAATGTTCCCTATGTAGTTGAAAATGGATGTGGAAAGTACTCTAAATTGCCTAAGGAGATAGCGAAAATTGTTGCGGACTGGTTTGGTCCAAAGGCCGATGAACTAAAAGAAATGTCCCAAAATGCATTAAAACTAGCAAGGCCTGATTCTGTGTTCAGAATTGTCCATGACATGCACGAGCTAGTAAAACAAAGAAGCTTATTGAGAGAGTATTCTTGTACAGCTTAA 1620 0.4272 MYNPATRVTKEPNAVLELGSRIGRFTLDTSSFLNLTSEACSPASLLSNYLYFNNLTRVASSSKRTVSLSLNNSGGGYKFRNILHDFNRAVRVHCERMPIGFASLRVGDGGDGGGGVGGGEGEGNDVGGNGNGVGVEDEGLGLKSGEGKKAKKVLILMSDTGGHRASAEAIKAAFYQEYGDDYQVFITDLWSEHTPWPFNQIPKSYSFLVKHGPLWRMTYYGTAPRLVHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVALRILRSRGLLDKIVFTTVITDLSTCHPTWFHKLVTRCYCPTTDVAKRAMKAGLQQTQIKIYGLPVRPSFIKPVRPKDELRRDLGMDEDLPAVLLMGGGEGMGPIEATAWALGDLLNDEGVPTGQILVICGRNKKLANKLSSIDWKIPVKVKGFVTKIEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGLEAGNVPYVVENGCGKYSKLPKEIAKIVADWFGPKADELKEMSQNALKLARPDSVFRIVHDMHELVKQRSLLREYSCTA* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0301 539 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 151 527 - -
Mtr1g0301 539 CDD GT28_Beta-DGS-like 153 526 - -
Mtr1g0301 539 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 94 529 - -
Mtr1g0301 539 MobiDBLite consensus disorder prediction 112 133 - -
Mtr1g0301 539 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 94 529 - -
Mtr1g0301 539 Gene3D Glycogen Phosphorylase B; 341 510 - -
Mtr1g0301 539 Pfam Monogalactosyldiacylglycerol (MGDG) synthase 163 331 IPR009695 GO:0009247|GO:0016758
Mtr1g0301 539 Pfam Glycosyltransferase family 28 C-terminal domain 389 506 IPR007235 GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0301 Mtr-Chr1 3393720 3399781 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0301 1 539 Glycosyltransferase AT4G31780 64.572 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0301 K03715 - gmx:100804814 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0301 1 3393720 3399781 Mtr1g0301 1 3393720 3399781 ECH