Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0259 ATGACCTTCATGTCATCCACCTTCCCTTCTTGTTTCCGTCCATCAAAAACCACCAACCACCACCACCCTCTGCCGTCTCATCCCAATCTCACAACCTACATATACCAAACAAACGCAGGCACAATTTCCTTAACATGGTCACGTTCCATTTTAGGTCACACCCTTCAAATTCATCTTCAAAATAACTCTTCCTATTTCGAACTCAACATAAAACCCTACCATTTCTTCAACAAAAATGGATCCAAGAAACTCTCTCACAACACACTTCTCTTTTGGAACCTCTCTCAAGCTAGCTTTGGATCCAAATCACCAGAACCTGAACCTTGCTCCAAATTCTATATAGCTTTAGTTGTTAAAAACGAAATCGTTCTTTATATAAACAACATGGAACATGCACGTACTAATAAGTTCTTGAGAGCACGTGATGAAACAAAGATTCCTCAAATTCTTGTTCTAAAAAAGGAACATGTGGACATGGAGGTAAATAGAAATGGATCATCCTCGTACGCTACAAAAACGAGGTTTGGTGGGAAAGTTAGAGAGGTTGAGATAGAGATAGGTAGTGATTGTGATGATGACAATAAAGGAAACAATACGAGGTTGTTGTTTAGTGTGGATGGGGAAAGGGTTTTGGAGGTGAGGAAATTGAAGTGGAAATTTAGAGGGAATGAGAGAGTGGAAATTGATGGGGTTTCTGTTTTGATTTGTTGGGATGTGCATGATTGGCTTTTTGAAAACGGTGGTAGTGATGGTGATGGACATGCGGTTTTCATGTTCAAGTTTGAGGAAAACGAGGTAGGAGGTTGTTGTGGGGAAAGGAGTGAGTTTGGTTCTTGTAAGAGTTGGTCGTCTTCGTCTCTTTCAATGTCATCTAATTCTGTTGGTGGAAGTTGCTCAGTTACGGAATGGTCTAGTTTTGAGGAGAGTGAGTTTTTGGTTCCTCTTGGGTTCTCTTTGTTTGTTTATGCTTGGAGAAGGTAA 981 0.4037 MTFMSSTFPSCFRPSKTTNHHHPLPSHPNLTTYIYQTNAGTISLTWSRSILGHTLQIHLQNNSSYFELNIKPYHFFNKNGSKKLSHNTLLFWNLSQASFGSKSPEPEPCSKFYIALVVKNEIVLYINNMEHARTNKFLRARDETKIPQILVLKKEHVDMEVNRNGSSSYATKTRFGGKVREVEIEIGSDCDDDNKGNNTRLLFSVDGERVLEVRKLKWKFRGNERVEIDGVSVLICWDVHDWLFENGGSDGDGHAVFMFKFEENEVGGCCGERSEFGSCKSWSSSSLSMSSNSVGGSCSVTEWSSFEESEFLVPLGFSLFVYAWRR* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0259 326 MobiDBLite consensus disorder prediction 1 24 - -
Mtr1g0259 326 Pfam Plant protein of unknown function (DUF868) 27 325 IPR008586 -
Mtr1g0259 326 PANTHER EXPRESSED PROTEIN 275 325 IPR008586 -
Mtr1g0259 326 PANTHER EXPRESSED PROTEIN 4 265 IPR008586 -
Mtr1g0259 326 PANTHER OS08G0422401 PROTEIN 275 325 - -
Mtr1g0259 326 PANTHER OS08G0422401 PROTEIN 4 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0259 Mtr-Chr1 2887587 2889591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0259 8 325 EF-hand Containing Proteins AT5G28150 31.737 2.74e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0259 - - gmx:100819926 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0259 1 2887587 2889591 Mtr3g2664 3 40665051 40666548 PCT