Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0256 ATGGCATCATCTTCATTACTCTCCTCTGTACCTTCACACTCTGCTTCACTTTCGATCCTCGATACCAACATCAAGGGAAAGCTTAAGCTTGGAACCAACGGTTTGAGATTTAACAATGAAGGAATCAACAACTTCTCCAATTTAAGGTCATCTGGTCGGATCTGTATGGCTGTTGCGACTAATGTTTCTCGGTTTGAGGGTATACCAATGGCTCCTCCTGATCCAATTCTTGGAGTTTCCGAAGCATTTAAAGCAGACACGAGCGATGTCAAGCTCAATCTTGGAGTTGGGGCCTACAGAACGGAAGAACTACAACCTTATGTGCTTAATGTTGTGAAAAAGGCAGAAAATCTTATGCTGGAGAGAGGGGAAAACAAAGAGTATCTCCCCATTGAGGGTTTGGCTGCATTTAATAAGGCAACTGCAGAGTTGTTGCTCGGAGCAGACAATCCAGCAATCAAACAGCAAAGAGTTGCCACTGTCCAAGGTCTTTCAGGAACTGGTTCTCTGCGACTAGGTGCAGCTCTGATAGAACGATATTTTCCTGGAGCAAAAGTTTTGATATCAAATCCTACGTGGGGTAATCACAAGAATATTTTCAACGATGCTCGAGTACCATGGTCTGAGTACCGATACTATGACCCCAAGACAGTTGGTTTGGATTTTGAGGGCATGATAGAAGATATAAAGTCGGCTCCGGAAGGAACTTTTGTGCTACTTCATGGATGTGCACATAACCCTACTGGTATTGATCCAACCCCAGAACAGTGGGAAAAAATAGCTGATGTAATTCAACTAAAGAACCACTTTCCATTTTTTGATGTTGCTTACCAGGGTTTTGCTAGTGGAAGCCTTGATGAAGATGCGGCTTCTGTGAGATTGTTTGTGTCACGTGGCATGGAGGTTCTCGTAGCTCAGTCATACAGTAAAAACCTCGGTCTTTATGCTGAAAGGGTTGGAGCTATCAACGTCATTTCCTCCTCACCAGAATCTGCAACAAGGGTAAAGAGCCAATTGAAAAGGCTTGCTCGACCAATGTACTCTAATCCACCTGTTCACGGGGCTAGGATTGTTGCTAATATTGTTGGGACTCCAGCTCTCTTTGATGAATGGAAAGCAGAAATGGAAATGATGGCTGGAAGGATAAAAACTGTTAGACAGGCACTATATGATAGTATTTCTTCAAAAGACAAAAGTGGAAAGGATTGGTCATTCATACTTAAGCAGATAGGCATGTTCTCATTCACGGGCTTGAACAAGAGCCAGAGTGACAATATGACAAATAAGTGGCATATATACATGACAAAGGATGGAAGGATTTCCCTGGCAGGATTGTCACTGGCCAAATGTGAATACCTTGCAGATGCTATTATCGATTCATATCATAATGTCAGCTGA 1398 0.4285 MASSSLLSSVPSHSASLSILDTNIKGKLKLGTNGLRFNNEGINNFSNLRSSGRICMAVATNVSRFEGIPMAPPDPILGVSEAFKADTSDVKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGENKEYLPIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAALIERYFPGAKVLISNPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIEDIKSAPEGTFVLLHGCAHNPTGIDPTPEQWEKIADVIQLKNHFPFFDVAYQGFASGSLDEDAASVRLFVSRGMEVLVAQSYSKNLGLYAERVGAINVISSSPESATRVKSQLKRLARPMYSNPPVHGARIVANIVGTPALFDEWKAEMEMMAGRIKTVRQALYDSISSKDKSGKDWSFILKQIGMFSFTGLNKSQSDNMTNKWHIYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0256 465 PRINTS Aspartate aminotransferase signature 238 257 IPR000796 GO:0006520|GO:0008483
Mtr1g0256 465 PRINTS Aspartate aminotransferase signature 269 281 IPR000796 GO:0006520|GO:0008483
Mtr1g0256 465 PRINTS Aspartate aminotransferase signature 337 362 IPR000796 GO:0006520|GO:0008483
Mtr1g0256 465 PRINTS Aspartate aminotransferase signature 406 424 IPR000796 GO:0006520|GO:0008483
Mtr1g0256 465 Gene3D Aspartate Aminotransferase, domain 1 68 457 IPR015422 GO:0003824
Mtr1g0256 465 SUPERFAMILY PLP-dependent transferases 63 459 IPR015424 -
Mtr1g0256 465 Gene3D - 123 364 IPR015421 GO:0003824
Mtr1g0256 465 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 307 320 IPR004838 GO:0003824|GO:0009058|GO:0030170
Mtr1g0256 465 PANTHER ASPARTATE AMINOTRANSFERASE, CYTOPLASMIC 14 463 - -
Mtr1g0256 465 Pfam Aminotransferase class I and II 91 457 IPR004839 GO:0009058|GO:0030170
Mtr1g0256 465 CDD AAT_like 92 457 - -
Mtr1g0256 465 PANTHER ASPARTATE AMINOTRANSFERASE 14 463 IPR000796 GO:0006520|GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0256 Mtr-Chr1 2850782 2854858 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0256 K00811 - gmx:547792 807.364