Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0251 ATGGAACCAGAAGTAAGCATAGAAGGCTCTTCAACAATCCAAATCGCCGTAATCCCAATAGGACAAATCCCACCACCACTCCTCCGCGACTATTACTCCCTCCTCCTCCCACTCCACACCATCCCTCTCTCCGCCATCAGCTCTTTCTACACCGAACACCAGAAATCCCCTTTCGCTCATCAACCTTGGGATTCCGGTTCTCTTCGCTTCAAATTCGTACTTGGCGGCGCTACTCCTAGTCCCTGGGAAGATTTTCAATCGCATCGGAAAACTCTTGCTGTTGTTGGCATTGTTCATTGTCCTTCTTCGTTGGATCTTAATGATGTTGTTGATCAGTTTGCCAGTTCGTGTAAATCTTATCCTTCTTCGCTTGTTGATCGTTGCTTTGCGTTTTACCCTAATGATTCTCAGCTTGAGGATGGAAGTAAGAGAGGTGGAAATTTGAGGTTGTTTCCACCTGCGGATCGTGCAACGTTAGAGTTTCATTTGAATACTATGATGCAAGAAGTAGCTGCTTCGTTGCTAATGGAGTTTGAGAAGTGGGTACTTCAAGCAGAATCTTCTGGAACTATTCTCAAGACACCTTTGGATTCTCAAGCTAGTCTCAGCTCAGAGGAGGTTATCAAGGCCAAAAAACGGAGACTTGGGCGTGCTCAGAAGACGATTGGTGATTACTGCTTGCTGGCAGGTTCTCCTGTTGATGCTAATCTTCATTATTCTACTGCATTAGAACTTGGCAGGTTGACTGGGGATTACTTCTGGTATGCTGGTGCATTGGAGGGCAGTGTTTGTGCCTTGCTGATTGACCGTATGGGCCAGAAAGATTCAGTCTTGGAGGATGAAGTTAGATATCGTTATAATAGTGTCATCTTGCATTACAAGAAGTCACAAGACAATACTCAGCGAGTTTCCCCCATAACTTTTGAACTTGAAGCTACTTTGAAATTAGCAAGGTTCCTTTGCAGGCGAGAGCTGGCCAAGGAGGTGGTGGAGTTGTTAACCACAGCTGCAGATGGTGCTAAATCTTTAATTGATGCAAGTGATAGACTCATATTATACATTGAAATAGCTCGTTTGTATGGTAGTCTTGGATACCAGAGGAAAGCTGCTTTCTTTTCGAGGCAGGTTGCTCAGTTATATTTGCAGCAAGATAATAGGCTGGCTGCAATTAGTGCTATGCAAGTTTTGGCAATGACCACAAAAGCTTATCATGTTCAAAGTAGATCATCAGTTTCCGATCATTCTATCCATACTAAGGGAATTGGATCTGATAAACCTGATGGTGGGAAAATATATCACCAATCAGTTGTCTCATTGTTTGAGTCTCAATGGAGTACCATCCAGATGGTTGTATTAAGAGAAATTCTGCTCTCTGCAGTTCGTGCTGGAGATCCTCTTACTGCATGGAGTGCAGCGGCACGACTACTTAGGTCGTACTATCCTCTAATAACTCCTGCTGGGCAGAATGGCCTTGCTAATGCACTTTCAAATTCGTCTGAGAGGCTACCACCAGGGACTCGTTGTGCCGATCCCGCCTTACCTTTTATAAGGGTGCATTCCTTTCCTGTCCACCCCACACAAATGGACATCGTTAAACGTAATCCTGCTAGAGAAGACTGGTGGGTGGGTTCTGCTCCTTCAGGCCCTTTCATTTACACGCCATTCAGTAAAGGAGATCCAAATAATATCAAGAAGCAAGAGCTTGTTTGGATTGTTGGAGAGCCGATCCAGGTTTTAGTGGAATTGGCAAACCCATGTGGCTTTGATTTAAGAGTCGATAGCATATATCTGTCTGTGCATTCAGGAAATTTTGATGCTTTTCCTGTGAGCATAAGCCTTCTACCAAATTCTTCAAAAGTGATTACCTTATCTGGCATTCCAACATCAGTGGGGCCAGTTACAATTCCTGGGTGCATTGTTCATTGTTTTGGTGTTATTACTGAACACCTGTTTAAAGAGGTTGACAATCTGCTTCTTGGGGCCGCACAAGGGCTTGTCCTTTCTGACCCTTTCCGTTGTTGTGGATCTCCAAAGTTGAAGAATGTATCTGTTCCAAGTATTTCTGTAGTACCACCACTTCCATTGCTGATATCACATGTTGTTGGAGGTGATGGGGCCATCATTTTGTACGAAGGCGAAATTCGCGATGTGTGGATAAATCTGGCTAATGCAGGCACAGTTCCAATTGAGCAGGCGCATATTTCACTGTCAGGGAAAAATCAAGATTCTGTAATTACATATTCTTCTGAAACATTAAAATCTCACCTCCCTCTAAAGCCTGGAGCAGAAGTTACATTCCCTGTGACTTTGCGAGCCTGGCAGGTTGGTGTGGCAGATGCTGATAGTACGAGGCACTCCAAAGATGCAAGTTGCCCATCGCTATTGATACACTACGCCGGTCCACTGAAAACCTCTGAAGATCCAAATGCTGTATCCCCCGGTAGACGCCTCGTTGTTCCCCTTCAGATTTGTGTTTTGCAGGGTTTGTCTTTTGTGAAGGCTCAGCTGCTTTCAATGGAATTTCCTGCTCATGTTAGTGAAAATCTTCCTAAGTTGGACGATGTGAATAATAGTTCCAATGGAGGACATGTTAACTCAGTGGACAGATTGGTCAAAATAGATCCTTTCAGAGGAAGCTGGGGACTGCGTTTTCTTGAACTTGAGCTGTCTAATCCAACTGACGTTGTATTTGAAATCAATGTCTCTGTCAAACTGGAGAACAACAGTAACGAGGACAATCATTTAGCTGATCGGGATTCTACAGAATACGGCTATCCTAAAACAAGAATTGATAGAGATTGCTCAGCAAGGGTTCTTGTGCCTCTTGAGCATTTTAAATTACCCGTTCTTGACGATTCCTTTTTATCGAAGGACACTCAGACAGATGGGATTGGTGGAGGAAGAAATTCATCATTCTCTGAAAAGAACAGCAAAGCCGAACTCAATGCTTGCATCAAGAACCTTGTATCTAGGATTAAGGTTCAATGGCACTCAGGACGCAATAGCTCTGGAGAGTTAAATATCAAGGATGCTATCCAGGCTGCTCTACAGACATCAGTCATGGATGTGTTGCTGCCAGATCCACTGACATTTGGCTTCAAGCTTGTTAAAGATGGATCTGATTCAGATAATATTGATCCGGTTAAAGAATCTGATTTACCTGAATCCCCTGCTTCCAAAAGTTCTGTGCTTGCACATGAAATGACACCAATGGTGGTTGTGGTCCGTAATAACACAAAGGATATGATCAAAATGAATCTTAATATTACATGCAGAGATGTAGCTGGGGAAAACTGTGTAGACGGTACCAAATCAACTGTTCTGTGGACCGGTGTCCTGAGTGAAGTTACCATTGAAATTCCCCCACTTCAACAAATCAAACATTCTTTTTGCCTGCATTTCCTTGTCCCAGGAGAGTATACACTACTTGCCGCAGCAGTGATCGATGATGCAAATGACATCCTTCGGGCTCGTGCTAGGGCAACTTCATCTGCTGAGCCAATTTTTTGTCGTGGACCACCATACCACCTTCGTGTCCTTGGGAATACATGA 3552 0.4386 MEPEVSIEGSSTIQIAVIPIGQIPPPLLRDYYSLLLPLHTIPLSAISSFYTEHQKSPFAHQPWDSGSLRFKFVLGGATPSPWEDFQSHRKTLAVVGIVHCPSSLDLNDVVDQFASSCKSYPSSLVDRCFAFYPNDSQLEDGSKRGGNLRLFPPADRATLEFHLNTMMQEVAASLLMEFEKWVLQAESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANLHYSTALELGRLTGDYFWYAGALEGSVCALLIDRMGQKDSVLEDEVRYRYNSVILHYKKSQDNTQRVSPITFELEATLKLARFLCRRELAKEVVELLTTAADGAKSLIDASDRLILYIEIARLYGSLGYQRKAAFFSRQVAQLYLQQDNRLAAISAMQVLAMTTKAYHVQSRSSVSDHSIHTKGIGSDKPDGGKIYHQSVVSLFESQWSTIQMVVLREILLSAVRAGDPLTAWSAAARLLRSYYPLITPAGQNGLANALSNSSERLPPGTRCADPALPFIRVHSFPVHPTQMDIVKRNPAREDWWVGSAPSGPFIYTPFSKGDPNNIKKQELVWIVGEPIQVLVELANPCGFDLRVDSIYLSVHSGNFDAFPVSISLLPNSSKVITLSGIPTSVGPVTIPGCIVHCFGVITEHLFKEVDNLLLGAAQGLVLSDPFRCCGSPKLKNVSVPSISVVPPLPLLISHVVGGDGAIILYEGEIRDVWINLANAGTVPIEQAHISLSGKNQDSVITYSSETLKSHLPLKPGAEVTFPVTLRAWQVGVADADSTRHSKDASCPSLLIHYAGPLKTSEDPNAVSPGRRLVVPLQICVLQGLSFVKAQLLSMEFPAHVSENLPKLDDVNNSSNGGHVNSVDRLVKIDPFRGSWGLRFLELELSNPTDVVFEINVSVKLENNSNEDNHLADRDSTEYGYPKTRIDRDCSARVLVPLEHFKLPVLDDSFLSKDTQTDGIGGGRNSSFSEKNSKAELNACIKNLVSRIKVQWHSGRNSSGELNIKDAIQAALQTSVMDVLLPDPLTFGFKLVKDGSDSDNIDPVKESDLPESPASKSSVLAHEMTPMVVVVRNNTKDMIKMNLNITCRDVAGENCVDGTKSTVLWTGVLSEVTIEIPPLQQIKHSFCLHFLVPGEYTLLAAAVIDDANDILRARARATSSAEPIFCRGPPYHLRVLGNT* 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0251 1183 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 9 191 IPR013935 -
Mtr1g0251 1183 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 270 IPR013935 -
Mtr1g0251 1183 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 751 IPR013935 -
Mtr1g0251 1183 PANTHER TRAPP II COMPLEX, TRS120-RELATED 1 1181 - -
Mtr1g0251 1183 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1181 IPR013935 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0251 K20306 - gmx:100784850 2080.06