Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0240 ATGGATACATTACCAACAACATCGTCGTCGAAGCGAGGTGGAGGAGGAGGAAGATCAAAAATCGTTCAAACATCAAAACCTTCCCTCCTCTTAGCTTTCTTCTCTTGCGTCGCTTGGCTTTACGTCGCCGGCAGGTTATGGCAAGATGCTGAGAATCGGAATTTACTTGCTAGTCTTCTCAAAAAGAACTCATCACAGAGGCCTAAGGTTCTTACGGTGGAAGATAAGTTAATGGTACTAGGGTGCAGGGATCTGGAGAGGAGGATTGTGGAAGCTGAGATGGAATTGTCGTTGGCCAAGAGCCAAGGGTACCTCAAAGGACAACGGCAGCAAACTGGTTCTTCTGACCGTAGGCTTCTTGCTGTTATTGGAGTATATACTGGATTTGGAAGCAAACTCAAAAGAAATGTATTCAGAGGGTCTTGGATGCCTAGAGGTGATGCCTTGAAAAAACTTGAAGAAAGAGGAGTGGTCATACGTTTTGTAATTGGTCGGAGTCCTAATCGAGGTGATAGCTTGGATCGCAATATTAATGAGGAAAACCGCTCAACAAAAGATTTCTTGATTCTTGAAAGTCACGAGGAAGCTCAAGAAGAGTTGCCTAAAAAAGCAAAAATCTTCTTTAGTACGGCGGTTCAGAACTGGGATGCTGATTTTTATGTGAAAGTTGATGACAGTATTGACATTGATCTCGAGGGTTTAATTGCTCTTCTTGACCGTCGACGTGGCCAGGATGGTGCATATATTGGATGCATGAAGTCAGGAGATGTGATATCGGAAGAGGGAAAGCTTTGGTATGAACCTGATTGGTGGAAATTTGGGGATGAAAAATCGTATTTCCGACATGCATCTGGTTCGCTTGTTATACTTTCGAAGAATTTGGCACAGTACATTAACATAAACAGTGTATCTTTGAAGACCTATGCCTATGATGATACAACATTGGGATCATGGATGATGGGCGTCCAATCAACATATATAGACGACAGTCGGCTTTGCTGCAGTAGCATCAGTAAAGATAAGGTATGCTCGCTGGCTTGA 1041 0.4323 MDTLPTTSSSKRGGGGGRSKIVQTSKPSLLLAFFSCVAWLYVAGRLWQDAENRNLLASLLKKNSSQRPKVLTVEDKLMVLGCRDLERRIVEAEMELSLAKSQGYLKGQRQQTGSSDRRLLAVIGVYTGFGSKLKRNVFRGSWMPRGDALKKLEERGVVIRFVIGRSPNRGDSLDRNINEENRSTKDFLILESHEEAQEELPKKAKIFFSTAVQNWDADFYVKVDDSIDIDLEGLIALLDRRRGQDGAYIGCMKSGDVISEEGKLWYEPDWWKFGDEKSYFRHASGSLVILSKNLAQYININSVSLKTYAYDDTTLGSWMMGVQSTYIDDSRLCCSSISKDKVCSLA* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0240 346 Pfam Galactosyltransferase 134 323 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr1g0240 346 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 341 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr1g0240 346 MobiDBLite consensus disorder prediction 1 20 - -
Mtr1g0240 346 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT3 3 341 - -
Mtr1g0240 346 Coils Coil 82 102 - -
Mtr1g0240 346 Pfam Domain of unknown function (DUF4094) 25 102 IPR025298 -
Mtr1g0240 346 Gene3D - 148 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0240 Mtr-Chr1 2685480 2692029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0240 78 346 Glycosyltransferase AT2G25300 78.067 8.23e-162 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0240 K20854 - gmx:100816327 616.305