Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0234 ATGGCTTCCAACAAGCTTAGTGCACTAATTATAATATTTTCTCTCTTTGCTCATTCAACATTTTCACATGATTGCGCTTCATGCAAACCAACTCCAATTAGTCCTCCTCCACCTTCAAAAACACCAAAGGCTTGTCCTCCACCACCTTCAACAACGCCTAAGGCTAGCCCTCCACCTCCATCAACTACGGCTAGCCCTCCACCTAAGGCTAGTACTCCACCTCCTTCAACGCCTAAGGCTAGCCCTCCACCTCCGTCAATGCCTACGGCTAGCCCTCCACCTAAGGCTAGTACTCCACCTCCTTCAACGCCTACGGCTAGCCCTCCACCTCCTTCAACAACGCCTACGGCTAGCCCTCCTACTCCTTCAACAGCACAAAAATGCCCTAGTGACACATTAAAGCTAGGTGTATGTGCTGATGTTCTAGGACTTGTTAATGTTATTGTTGGAAGTCCTGCTTCAAGCAACTGTTGTACATTGATTCAAGGTTTGGCTGATTTGGACGCAGCAGTTTGTCTTTGTACCGCTATTAAGGCTAACGTTCTTGGTATCAACTTGAATGTGCCTGTCACACTTAGTCTCCTACTTAGTGCTTGTCAAAAATCTGTTCCTAATGGTTTCCAATGTTCATAG 633 0.466 MASNKLSALIIIFSLFAHSTFSHDCASCKPTPISPPPPSKTPKACPPPPSTTPKASPPPPSTTASPPPKASTPPPSTPKASPPPPSMPTASPPPKASTPPPSTPTASPPPPSTTPTASPPTPSTAQKCPSDTLKLGVCADVLGLVNVIVGSPASSNCCTLIQGLADLDAAVCLCTAIKANVLGINLNVPVTLSLLLSACQKSVPNGFQCS* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0234 210 MobiDBLite consensus disorder prediction 25 128 - -
Mtr1g0234 210 PANTHER PROLINE-RICH PROTEIN DC2.15 1 210 - -
Mtr1g0234 210 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 131 209 IPR036312 -
Mtr1g0234 210 MobiDBLite consensus disorder prediction 30 118 - -
Mtr1g0234 210 Pfam Hydrophobic seed protein 128 210 IPR027923 -
Mtr1g0234 210 PANTHER - 1 210 - -
Mtr1g0234 210 PRINTS Proline rich extensin signature 26 47 - -
Mtr1g0234 210 PRINTS Proline rich extensin signature 53 69 - -
Mtr1g0234 210 PRINTS Proline rich extensin signature 70 87 - -
Mtr1g0234 210 Gene3D - 125 210 IPR036312 -
Mtr1g0234 210 SMART aai_6 128 209 IPR016140 -
Mtr1g0234 210 CDD HPS_like 126 209 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0234 Mtr-Chr1 2617795 2618823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0234 118 209 Acyl Lipid Metabolism Gene Families AT4G22490 41.053 3.02e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0234 - - mtr:MTR_1g012710 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0234 1 2617795 2618823 Mtr1g0234 1 2617795 2618823 ECH