Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0197 ATGCGACGCAATCCTCCGTCCCTCCATCTCCTCGCCGCAACCGACGCCGCCTTCTCCACCGCCACAATGTCTTCACGCCCCTACCACCGAGGTCACCGGAGAGGATACTCCGGCCGTTCATACTCCGGCGGAAGAGACCAGTTAGCTACCGGAGACGATCACTTACGGTCAGTCCGCGACGCCAATTCAGCAATCCGGCGAGGTGAGAGTGAAAATGTTGCGAATCAAATACAGTACAATCCTCGTCCATATCCACCACCTCAATATCCACCTTACGATCTTCATCGTCATCCTCCACCGCCGTTTTACCATCATAATCCACTTTACAATCCTCGTCCTCATCCACCACCTCAATATCAGAATCCTTCTTATAATCCTCGGCCTCATCCTCCGCCACTGCGTTTTCGGCCGCCGTATGATAACCGACGTGAATTTCGTCCGCAACAGAATTTTTATGCAAAGCCTGCAGATTATCGAGAGTGGGAGAATGCATTGACGCCACCACCTCCTCGTTGTGAAAGGTTTAAAGTCCTTTCCTATAATATATTGGCGGACTACCTTGCTATGGACCACTGGAGAAAACTTTATTATCATATACCTTCTTACATGTTGAACTGGCAGTGGAGAAAGAGTAAAATTGTTTTGGAGCTTGGCCTGTGGTCTGCCGATATCATGTGTTTACAGGAGGTTGATAGGTTTCACGAGTTGGAGGAGGATTTGAAGTTTAAGGGATACAGAGGCATCTGGAAGATGCGTACGGGCAATCCAGTTGATGGTTGTGCAATCTTTTGGCGAACATCAAGGTTCAATTTGGTATATGAAGAATGCATTGAGTTCAATAAGTTGGGACTCAGAGACAATGTTGCTCAAATATGTGTACTAGAGTGCATTAATCAAAATGGATCTCTCCCACCCAGCTTGACAGGTTCTCGTAAAGTTGTGGTTTGCAACATTCATGTGCTTTACAATCCGAATAGAGGAGAAATTAAACTTGGCCAGGTGAGAGTCCTGCTGGATAAAGCTCAAGCTGTTTCTCAACTTTGGAATAATGCCCCTGTTATTTTGTGCGGGGATTTTAATTGTACGCCTAAGAGTCCATTGTACAACTTTATCGCAGAACAAAAGCTAGATTTGTCTGGAATAGATAGAAATAAAGTATCAGGGCAAGCTTCTGCTGTAATTCGAGCACCATGGACCTATGGTCCTAAATCTAGTGAAAGAAGATCAGCTAATGTTTCGGTTCAGGCCATATCCGCTGAAGGTGACAAGGAAGTTACTGTTGAACAAAATAGTTCTTCGTCAGACAAGCAGAATCCGGTCACTGAGAGTAGCAGTTTAGATAAACAAAATACTCGCCCTGTGATGATTATGTCTGATAAGACAGATGTGCAGTGTAGCAGGGAGACTGATACATGTGCAGGAAAAGATACTCGGGAGGCGGTTGACCATAATAAGATTTTTGTTGAAGTTGATGGCACAAAAGAGGGGCCAAATCCTTCTTATAATAAAGGTATAAATGATGATGAAATTCATGACGTCACACCTATAACATCTTCAACTCTTGAGACAGTTCGCACTGACCCACCTGGGATGGGAAGCACAGAACGTATATCAGATGCTATCTCAGCTACAGATCAAGAATCATTAAGTGAAAAGTCCAACTTGCACGACCATAAAGGGACCACGCATATGGAGTCTAACTGTTCCCCAACCTCTCTTCAAGAAGGTGATCAAGCTTCAAAGGTGAAGATAGATATTGAGTCAACAGATCTTATTAACCTAGAAGCATCATCAAATAAACCATCCAGCAATACTTCAGTTTCTGATGATTTTGAAGCCCCTCATCCAGGGTATAGAGAAAGCTCATCTTACGAGGCCATTGCTAATGACCAAATGAATTTATCTTCAACTGAATATGTAGTTGACAAATCACATAAAATTACCAACATTGACTTTCTACTAAATGAAAAGCTAGAGAAATTTTCCTTTGATGAGATAGATCAAGCCGATGTAAACAGTGGGAATATTGGTGAAGATGCCGTCGATTTCATAAATGCCCTGCATAGTGCCAGAGAAGAAAGCAATGATACAGAGGATGACTTATCTCCAAGTCCGATGTCTAAGTATATTGATGCAGAGAGAACTACTTATAATCCATCATTATGGACTCCTGCTGAGATAGAAACTGCGACAGGAAATGCAGAGTGCACGTTCTTGGGGCACCCTTTATCGCTTAGGAGCACATACACAGAAGCTATGGTAGATGACTCTTCAGGGACTAGGGACCCCAATGGTGAGCCCTTGGTAACTAGTTACAACAAGTGCTTCTTGGGCACTGTTGACTATATTTGGCGATCTGAAGGTCTGCAAACAACCAGAGTTCTTGCTCCAATACCTAAACGAGTCATGGAAAGCACTCAAGGATACCCAACAAAGAAATGGGGTAGCGATCATATTGCCTTGGTTTCAGAGCTAGCTTTCATGGAAGATGGTACTGCCATCAGCAAGGATGTTGTATAG 2520 0.4365 MRRNPPSLHLLAATDAAFSTATMSSRPYHRGHRRGYSGRSYSGGRDQLATGDDHLRSVRDANSAIRRGESENVANQIQYNPRPYPPPQYPPYDLHRHPPPPFYHHNPLYNPRPHPPPQYQNPSYNPRPHPPPLRFRPPYDNRREFRPQQNFYAKPADYREWENALTPPPPRCERFKVLSYNILADYLAMDHWRKLYYHIPSYMLNWQWRKSKIVLELGLWSADIMCLQEVDRFHELEEDLKFKGYRGIWKMRTGNPVDGCAIFWRTSRFNLVYEECIEFNKLGLRDNVAQICVLECINQNGSLPPSLTGSRKVVVCNIHVLYNPNRGEIKLGQVRVLLDKAQAVSQLWNNAPVILCGDFNCTPKSPLYNFIAEQKLDLSGIDRNKVSGQASAVIRAPWTYGPKSSERRSANVSVQAISAEGDKEVTVEQNSSSSDKQNPVTESSSLDKQNTRPVMIMSDKTDVQCSRETDTCAGKDTREAVDHNKIFVEVDGTKEGPNPSYNKGINDDEIHDVTPITSSTLETVRTDPPGMGSTERISDAISATDQESLSEKSNLHDHKGTTHMESNCSPTSLQEGDQASKVKIDIESTDLINLEASSNKPSSNTSVSDDFEAPHPGYRESSSYEAIANDQMNLSSTEYVVDKSHKITNIDFLLNEKLEKFSFDEIDQADVNSGNIGEDAVDFINALHSAREESNDTEDDLSPSPMSKYIDAERTTYNPSLWTPAEIETATGNAECTFLGHPLSLRSTYTEAMVDDSSGTRDPNGEPLVTSYNKCFLGTVDYIWRSEGLQTTRVLAPIPKRVMESTQGYPTKKWGSDHIALVSELAFMEDGTAISKDVV* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0197 839 MobiDBLite consensus disorder prediction 424 456 - -
Mtr1g0197 839 MobiDBLite consensus disorder prediction 564 578 - -
Mtr1g0197 839 Gene3D Endonuclease/exonuclease/phosphatase 149 467 IPR036691 -
Mtr1g0197 839 Gene3D Endonuclease/exonuclease/phosphatase 621 836 IPR036691 -
Mtr1g0197 839 MobiDBLite consensus disorder prediction 596 610 - -
Mtr1g0197 839 MobiDBLite consensus disorder prediction 49 66 - -
Mtr1g0197 839 MobiDBLite consensus disorder prediction 21 140 - -
Mtr1g0197 839 MobiDBLite consensus disorder prediction 491 511 - -
Mtr1g0197 839 MobiDBLite consensus disorder prediction 596 619 - -
Mtr1g0197 839 MobiDBLite consensus disorder prediction 80 135 - -
Mtr1g0197 839 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 34 828 - -
Mtr1g0197 839 MobiDBLite consensus disorder prediction 420 456 - -
Mtr1g0197 839 MobiDBLite consensus disorder prediction 541 578 - -
Mtr1g0197 839 Pfam Endonuclease/Exonuclease/phosphatase family 178 379 IPR005135 GO:0003824
Mtr1g0197 839 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 34 828 - -
Mtr1g0197 839 SUPERFAMILY DNase I-like 162 377 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0197 Mtr-Chr1 2235695 2246125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0197 206 374 EF-hand Containing Proteins AT5G54130 27.222 1.05e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0197 - - gmx:100810446 920.998