Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0188 ATGGGTAGTGAGAATGAAATGATTCCATGTCTAGATTTTTCCAAGTATGATTTAGGAGTAGTTGATCAAGAAGGGAGTGAGGAGTGGAAAAAAATGAGCAAAAAAGTGAGAGAAGCATGTGAGAGTCATGGTTGCTTCATCATAATGTATGATGAGAATAAGATCCCAAAGAATTTATGTGAAAACATGTTCATAGGGATGAAAGACTTGTTTGATTTACCTGAAGAAATTAAGAGGAAACACATAAGCTCTACACCTTTTAGTAGCTACACTAGTGATGATCCCAAAATTCCTCTATCTCAAACCTTTGGGATTGATGATGCTTCTCTTGGAGATAATGCTTTGGCTTTTACTAATCTCATGTGGTCTCAAGGAAACCCAACTTTCTGTGAGACAATGAAGACCATGAGTTACAAGATGCTTGAATTACATTCCCTCGTTCTGAAGATGATCATAGATGGTTATGGTCTTCCAAAACAATACACTTCAACCATTGAAGAATTGAAGAGCCGTAGTAGTTTTCGATTGATGAAATACAAAGTTCCTGAAATCAACAAAGATTATGAAACTGCCTTAGTATCTCACACTGACAAAAATACCTTAACCACTTTATGCCAAAATGAAGTCCAAGGTCTTGAGGTTCTTACTAAAACAAACCAATGGATTAGATTGAACATACCGCAGGGAGGCTTTGTTGTCATTGTTGGTGACACACTCAAGGCATGGAGCAATTGTAGACTTCATGCAGCTGCACACAAAGTGACGATGTGTGGAGATAAAGAAAGGTATTCATTTGCACTATTTTCCGTCCCAAAGAAAGATGTGAAAATTGAGGTGCCACATGAATTGGTGGAGGATAAAATGCATCCTCTTCATTACCGGTCATTCAATTATGATGATTACTTAGACTACGTCGTGTTAGGTCTCAAAGAAAATAAAGAAATTATTACACTAGAGGCATTTTTAGGTGTTTGA 975 0.3703 MGSENEMIPCLDFSKYDLGVVDQEGSEEWKKMSKKVREACESHGCFIIMYDENKIPKNLCENMFIGMKDLFDLPEEIKRKHISSTPFSSYTSDDPKIPLSQTFGIDDASLGDNALAFTNLMWSQGNPTFCETMKTMSYKMLELHSLVLKMIIDGYGLPKQYTSTIEELKSRSSFRLMKYKVPEINKDYETALVSHTDKNTLTTLCQNEVQGLEVLTKTNQWIRLNIPQGGFVVIVGDTLKAWSNCRLHAAAHKVTMCGDKERYSFALFSVPKKDVKIEVPHELVEDKMHPLHYRSFNYDDYLDYVVLGLKENKEIITLEAFLGV* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0188 324 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 312 - -
Mtr1g0188 324 Gene3D - 5 319 IPR027443 -
Mtr1g0188 324 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 4 312 - -
Mtr1g0188 324 Pfam 2OG-Fe(II) oxygenase superfamily 186 268 IPR044861 -
Mtr1g0188 324 Pfam non-haem dioxygenase in morphine synthesis N-terminal 8 92 IPR026992 -
Mtr1g0188 324 SUPERFAMILY Clavaminate synthase-like 8 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0188 Mtr-Chr1 2137322 2138658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0188 8 301 Glycosyltransferase AT5G59530 22.442 7.15e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0188 - - gmx:100817159 396.356