Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0187 ATGGCTACTACTCTTTCTGAAGCCTATCGAGATCACCCTCTGCACCTTCATCATATTATCCCCTTAGACTTTTCTTCATTTAGAACTTTGCCTGACTCCCATGCATGGCCTCAATCTAATGATGATGGTAGTGATAATTTCACATCCAATGGATGCTATGACAATGATGATGAAGATGGATCATGCATACCAATCATTGATCTCAATGATCCTAATGCTATGGAACAAATAGGCCTTGCATGTGAGAAGTGGGGTGCCTTCCAATTGAAGAATCATGGCATACCCTTAAATTTTATTGAAGAGGTTGAAGAAGAGGCAAAGAGACTCTTTTCTCTTCCTTCCAAGGAGAAACTTAAGGCCCTTAGATCGGCCGGTGGCGGCACCGGATACGGTAGAGCTCGAATATCACCATTCTTCCCCAAATTCATGTGGCATGAAGGATTCACAATTATGGGGTCCCCATCCAATGATGCTAAAAAGATCTGGCCTAATGACTACAAACGGTTTTGTGACACAATGGAGAACTACCAAAAGCAAATGAAGACACTAGCAGAGAAACTAACAAACATGATATTGAACATATTAGGAATTTCACAAGAACAAAACAAATGGATTGGTTCTAACAACCATGTTGGAGCAATGCAACTAAACTTCTACCCATGTTGTCCCGACCCAAAAAAAGCAATGGGTCTGGCCCCACACACAGACACATCCCTTTTCACAATCCTCCATCAAAGTCAAACAAATGGACTTCAATTATTCAAAGAAGGTGTAGGGTATGTTCCTGTGGACCCTCATCCAAATACACTTGTTGTTAACACTGGTGACATTCTTCATATATTGTCAAATTCTAGGTTTCGATGTTCTCTTCATCGTGTTGTTGTGAATGATATTAGTGATAGATATTCTGTGGCTTATTTTTATGGACCTCCAGTTGATTATTTGGTATCTCCTTGTGTTGGTGATAATTCTTTGCCACGTTTTCGTGCTTTGACCGTCAAAGATTATATTGGGATTAAAGCCAAGAATTTAGGGGGTGCTTTGTCTTTGATTAGTACATTACTTGATCATGATGATTAA 1080 0.3981 MATTLSEAYRDHPLHLHHIIPLDFSSFRTLPDSHAWPQSNDDGSDNFTSNGCYDNDDEDGSCIPIIDLNDPNAMEQIGLACEKWGAFQLKNHGIPLNFIEEVEEEAKRLFSLPSKEKLKALRSAGGGTGYGRARISPFFPKFMWHEGFTIMGSPSNDAKKIWPNDYKRFCDTMENYQKQMKTLAEKLTNMILNILGISQEQNKWIGSNNHVGAMQLNFYPCCPDPKKAMGLAPHTDTSLFTILHQSQTNGLQLFKEGVGYVPVDPHPNTLVVNTGDILHILSNSRFRCSLHRVVVNDISDRYSVAYFYGPPVDYLVSPCVGDNSLPRFRALTVKDYIGIKAKNLGGALSLISTLLDHDD* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0187 359 Pfam 2OG-Fe(II) oxygenase superfamily 214 310 IPR044861 -
Mtr1g0187 359 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 210 310 IPR005123 -
Mtr1g0187 359 Pfam non-haem dioxygenase in morphine synthesis N-terminal 63 163 IPR026992 -
Mtr1g0187 359 Coils Coil 166 193 - -
Mtr1g0187 359 SUPERFAMILY Clavaminate synthase-like 17 344 - -
Mtr1g0187 359 Gene3D - 18 343 IPR027443 -
Mtr1g0187 359 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 347 - -
Mtr1g0187 359 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 12 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0187 Mtr-Chr1 2125800 2128887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0187 63 347 Glycosyltransferase AT5G59530 29.677 4.82e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0187 K04124 - gmx:100808546 535.413