Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0184 ATGGCTTGTATGAATAATATATTCACACCGTTTCCACTCACCGCCGGTAACCGGAATCCAACAATTTATTTTCCCCGGCGGCGACCGAACTCAGTTTGTTTGGTGGCAAATTCGCCTGAATCTCCTTCTCCTCCTCCGGAAATAGAGCTGGAGTTCGTTGGGCCAAAACCAGAGGGTGATGGATCGTTTCCGGTGGATAAAGTGAAAGCAATAAGCGGAGAGAAGTTGATGAGGAGTATCATGTCGGATAACAAGATTGACCTTTATGCCACGTATGGGAAATTGATGAACTGCGGTGGAGGGGGTAGCTGTGGAACTTGCATAGTGGAGATCATTGAAGGAAAGGATCTTTTAAATGAAAGGACAAATACTGAACTAAAATATCTTAAGAAGAAACCTGAATCTTGGAGGTTGGCTTGTCAAACTATTGTAGGGAACAAAGAAAACTCTGGCAAGGTTGTTGTTCAAAGGATTCCTCAATGGAAGAAGTAA 492 0.435 MACMNNIFTPFPLTAGNRNPTIYFPRRRPNSVCLVANSPESPSPPPEIELEFVGPKPEGDGSFPVDKVKAISGEKLMRSIMSDNKIDLYATYGKLMNCGGGGSCGTCIVEIIEGKDLLNERTNTELKYLKKKPESWRLACQTIVGNKENSGKVVVQRIPQWKK* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0184 163 Gene3D - 63 162 IPR012675 -
Mtr1g0184 163 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 3, CHLOROPLASTIC 37 162 - -
Mtr1g0184 163 PANTHER FERREDOXIN/ADRENODOXIN 37 162 IPR001055 GO:0051537|GO:0140647
Mtr1g0184 163 Pfam 2Fe-2S iron-sulfur cluster binding domain 96 144 IPR001041 GO:0051536
Mtr1g0184 163 SUPERFAMILY 2Fe-2S ferredoxin-like 72 146 IPR036010 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0184 Mtr-Chr1 2097862 2100576 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0184 - - gmx:100807125 256.529