Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0178 ATGATGAAGCCGCGAAAGTCTTCTTTGAATCCATATGCAGCCGCGTACGTTCCTATGGCTAAAAGGGACACTAGTGTTAGAAGTTACGTGACAGAAGATTCCAAGGACTATAATGGGACTGTATGGTTTCAGCCTCCTCAATATACCACAAATGATGTGCAACTTGTTGAGAAGAACGCTCAAAGGCTCTCTCCGGGGAAAAACCAGCCTGCTTCGAGCTCTTACTTTTCATCGCCACAGAGTGTGGCACAGCTGACAGAGAATCAGTATATGGATGAAGAGCTTGATATTGATTTGGAATATCTTAGGATGACATTTCCTGGTATATCTGATGAGTCACTTGTAGATGTCTACAATGTAAACAGTGGTGACTTGGAAGCTGCTATTGAGATGCTAAGCCAACTTGAGTTTGATGATGCTGTTGATGCTCATGGAAGTCTTCCAGAGTCGCTGGATATTGGTGATGTTTCAGAGCCTGTTATGCCAGCTGACTCTGCTTCATCAAAACAGAAGAATGCAACAGCTGGAGCCAGTACTTCATCTCATCACCTGTGA 555 0.4396 MMKPRKSSLNPYAAAYVPMAKRDTSVRSYVTEDSKDYNGTVWFQPPQYTTNDVQLVEKNAQRLSPGKNQPASSSYFSSPQSVAQLTENQYMDEELDIDLEYLRMTFPGISDESLVDVYNVNSGDLEAAIEMLSQLEFDDAVDAHGSLPESLDIGDVSEPVMPADSASSKQKNATAGASTSSHHL* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0178 184 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 6 2 183 IPR038981 -
Mtr1g0178 184 Gene3D - 80 141 - -
Mtr1g0178 184 MobiDBLite consensus disorder prediction 146 184 - -
Mtr1g0178 184 MobiDBLite consensus disorder prediction 163 184 - -
Mtr1g0178 184 CDD CUE_CID7_like 96 138 IPR041806 -
Mtr1g0178 184 ProSiteProfiles CUE domain profile. 94 137 IPR003892 GO:0043130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0178 - - gmx:100781938 211.46