Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0176 ATGGACGGCAGGGAGGATAACTCAAATGGTGCTGTTGTTCCTAAGAAATCAAGATCTCTGGATCTTAAAAGTTTGTATAATTCGAAATTGACCGAAGGGGCACCAAAGGAAAATTTGAAGCGAAAGGGTAGTGGTAGTCACGGGGGTGGTGATGAGAAGGGGAGTAAACGAAAGAAGGTAAGAAAGGAGGTGGCTTTAAGTAGTTTAGATAATGCGGATGGTGGCGGTAAGCAGGTTGCTGATGAGGAGGATTTGGGTGAACCGGAATTGGGGGTGAGTGAAGGGTTTCATAGCATTAGCGGGCTTAATGGAGTTTTGGTAGGTGTTGCTAGTGATGTTTGTATTCCTAAGCGTAAGAGGACTTTAGTGGGGCGGAAGAAATCTGATGACGGTCAATCATCGAATCCTGTAGGGCATCCCAGGCAGGAAATTGGCAGCGATGATCTGGGGCCTAAGGTAGGTAGTGATGATTCGGGTAGGGCAGTTCAATCTTCAAAGGTTAATTTGAAGAAACGTTTTGATGAATTTAAGGAAAATAGGAATAGTGATTCAAATTCAATTTCAGCTCAGCATTTGAAGCAGAACGGGGATCATGCCCCTGATTCTGTTGTAAATAGTGGCCGTTCATCTTCAAAAAAGTCAAAAAAAAGGGATAGGAAACATAAGGTTCTGGCTTCTGATAAACCTAGGGTTTCCAAGGAGGCTGAGCCTTTGATTAATAGCTGTACAATATCTGTTGAATTGCATGAAGACGATGAGGAAAATCTTGAGGAGAACGCCGCAAGGATGCTTTCTTCAAGGTTTGATCCAAGCTGTACCGGGTTTTCTTCTAGTAGCAGGTCTTCTCCCCTGCCATCAGCTAATGGTTTGTCCTTTTTGCTATCTTCTAGTCGAAATATTGTTAATCATGGCTCAAAGTCTCGGTCGGGTTCGGAATCAGCCTCAGTTGATACTGCTGGCAGACATCTGAGGCCAAGGAAACAATACAATGATAAGGAAAAAAAGTCACGGAAGAGGCGTCATTTTTATGAAATTCTCCCTGGTCATGTAGATGCATATTGGGCATTGAACCGTAGGATTAAAGTATTTTGGCCTTTGGACCAGAGCTGGTATTATGGCCTTGTCAATGATTATGATGAGGCGCAAAGGCTTCACCATATCAAATATGACGACCGAGATGAAGAATGGATTAATCTCCAAACTGAGAGGTTCAAACTCTTGTTACTTCGTAATGAAGTTCCTGGACGTGCAAAGGGGGGAAGGGCTTCGACAAAAAGTAGAAGGTCTGATCAGCAAAATGGAAGCAAGTCGAGAAAAGAAAAGCAAAGAGGAGAAGAGATTAAGGAGGATGACAGCTGTGGTGGGAGCTCTATGGACTCTGAGCCTATAATTTCATGGTTGGCTCGATCTTCTCATCGGCTTAAATCTTCTTCTTTTCATGGCATTAAGAAACAGAAAACTTCTGTCACACATCCAAGTACAACCTCATCATTGCTATATGACGAACCCGTCTCAGCACAGGGAAATGGAACTAAAAGTTCTTCCAGGGGTGTTGCAAATAATCTGTCTTGTGGTTCTTTAGCACAAGATAAGTTGGGTGATAATTTGAGGGAGAAGTCCGCATTGCAAAGCACCACTCAAATTAAAGATCGCAAACAGCCCACTGTTTATTTTAGAAAGCGGTTTCGAAGGCCAGCTCCAATGTCGCCTCCTGTGCCTAAAGAGAAACACATCATTGTAAGTACACCCTGTTCTATATCTGGTGATCATGTGGTTGGTGGGATTCAGAGTGTAAAAGAACCAAGTGGCAGGAGGTTTGAGGGGCCACTGTGGTTCAATTATAACGAGGGAATATTAAAAATGATTTGGGACATGGAGTCAGCATCATTCAAATTTGACTTACACTTCCCTATAAAGCTGATATTAAATGAAGCTTTTCAATCCGAAAACTTGTGGCTGCTCAATGCTGTTTTGCTGCTTCGGTATGGGACAGTTGTGACCAAGTGGCCAAGAGTTTGTCTAGAGATGCTTTTTGTTGATAACGTGGCTGGGTTGAGATTTCTATTGTTTGAAGGCTGCTTGAAGATGGCTGCAACCCTTCTCTTTTTTGTCCTTAGGGTTTTCCATCAACCTGCTCCCCTAGGGAACAATGACTTGCACTTGCAGCTTCCATTTACATCTATTGGATTCAAGCTTTCCAGTCTTCATGCTATCAAGCAGCCACTTGTGTTTGCAATATATAATTTCTCCAGATTGAAGAATTCAAATTGGGTGTACTTGGATTCTAAGCTTAAGAGGCACTGCATACTCAGTAAGCAGCTCCATCTATCTGAATGCACATACGATAACATCCAGGCACTTCAGCATGGATCAAGCAAGTTCACGGCAGCTTCCATCAGTGAGCCCTCATCAGTCAAGGTAGTGAGGAAGAGGAGTAGACCAGGGATTAACATCATGGGTGTTTCCAAAGTGTCCACTCAAGTTGATACTCATCAATCTTCTGATGCCGGCGAGAGGAAGCTTCCTCCATTTGCTCTTTCTTTTGCTGCTGCACCTTCATTTTTTCTCTGTTTGCATCTCAAGTTGCTGATGGAGCAGTCGACAGCTCATCTAGACCTTTGTAATCATGTACCAGAGGATGGTCAGGAAGATGCTGCCTTGGGGACAGGTGGTTATTCCAGCATTGATGATTGTTCTAACCCGAATTCAGAAATTATTCTGCGGAAAGATACAACTTTGTCGAATGACGCTGCAGGTGATGGATTGTCATGTGTTGCGTTAGATCAATTAACCGGTCCCTCTACTTGTGGTGATCGAGTTGTCTCTCAAAATGACCAGAATACTGGTCTTCTTGGCACTGGAACTTCTATTTCCCATGGGTCTGAGAGGTTTGGTAATATTCACTCACCAGAGTTGCAATCCCATCATTCAGCACAGAAGCCAGGATCATTACCTTCAAGTTCTTTAATACACAAGGATAAGGCGGACAATGGTTCTCCATTTAATGGTGATCTACGTGTCCAAATCCCTTCAGTTGATGAATTTGAGAAACCTAATGCTCAACAGTCTCCTGTTTTGTCTTGGAATATGAATGGGAGCGTTATTCCAAGCTCCAATAGAACTGCTCCAAGAAGTTCTTACCGCCGGAATAATTCGTTGTCGTTGGGATTCCAGTCACCTGCATGGTCTGACAGCAAGACTGACTCCCTTTACAATGATTTTAGCAATGGACCCAAAAAGCCACGTACCCAAGTATCATATTCAGTGCCTTTTGCAGGGTATGAATTAAGTTCAAGGCACAAAAGCCATAATCAGAAAGGGCTTCCTAAAACACGTATTAGAAAGGCTAGTGAAAAGAAGTCCTCAGATGTTGCTAGGGTCCCTGAAAAGGATTTTGAATGCTTATCTTGTGATGCAAATGTCTTGATTACAGTTGGTGATAAAGGGTGGAGAGAATATGGGTCCCATGTTGTATTGGAGTTGTTTGAACAGAATGAGTGGAAACTCTCTGTAAAAATTTCAGGAGTCACAAGGTATTCATACAAAGCACATCAGTTTATGCAGCTCGGATCAACAAATCGTTTTACACATGCAATGATGTGGAAAGGAGGGAAGGATTGGATCTTGGAATTTCCTGACAGGAGCCAGTGGGCTCTATTCAAGGAGATGCATGAGGAATGCTACAACCGTAACCTCCGTGCTGCTTCAGTTAAAAACATACCTATTCCTGGTGTTCATTTGATAGAAGAAAATGATGATGATGTATCTGAGGCAACTTTTGTTCGCGGCACTATGTACTTCCGACAGCTTAAAACAGATTTTGAGATGGCTCTGGATTCATCCCGTGTACTGTACGACATGGATAGCGAGGATGAGCAATGGTTTTCAAACATTCGAAGTTCTGAGAACTACAACGGTGACTTGAATGGGATCACGGAGGAGTTGTTTGAGAAGACAATGGACTTGTTTGAAAAGGCTGCATTTGCTAAGCTGCGTGATCAGTTTACACCAAATGAAATAGAGGAACTTGCGCTTCATGTCGGACCTTTGTGTATTGTCAAAATCATTTATGACCATTGGCACCAGAGAAGGCAGAAGAAGGGAATGGCTTTAATACGGCACTTTCAGCCCCCTATGTGGGAACGATATCAACAGCAGCTGAAGGAGTGGGAAGTAGCCGTGACCAAGAATAACCTTTCTTCTAATGGAAGCCTGGATAAGGGTGCAACTTTGGAGAAGCCCTCCATGTTTGCTTTCTGTTTGAAACCAAGGGGTTTGGAAGTACAGAACAAAGGATTAAAGCATCGATCTCAAAAGAAAATATCAGTCTCTGGGCATACAAACCGTTTTAGATATCATGATGGCTTCCACACTACTGGTAGAAGACCAAATGGCCTGGCATTTACTGATGAAAGGTTTGTATACCCAGGCCATAGTTATGATTCTTTGGATGATTCTCCATTGCCTCTGACGTCACCTAGAGTATTCTCCCCACAAGATGCTGCCAGCATGAAATATTATTCTATGAGCAATGATGCATACTACAGAAATCATATGCAGAAACTTCACAGGAGCAAGTCCAAGAAACATGGGTCATTTATGTATAATAATGGTTCACAGCCGTCAGGTTCTAACAGTCAGAGAATGCCTGTGTCAGAAAAAAGAAACGGAGTTCGAATGATCAATCATGACTTACCAGGTCACAGGCAGTACGCACCGGATTGCCCTCAGAAGCATGGGGTTGAACAATTGGATGGTTCAGACTGCGTGCCGCAGCAATTGGATGAGGAGTTTAGACTGCGCGAAGCACAAAATGCTTCTCTCCGTGTACGTAACACAGCTAAGTTTAAGAGACACAGGGCTAACAACTTGCATTCTATGGCAGAGGTGGCAATTCACAGGGCAATGGTTGCTCTTATGACTGCTGATGCGATAAAGGCTTCCAACGAAGTGGTTGGTGGTGGTAGTAAAACCAACAGCTGA 4983 0.4323 MDGREDNSNGAVVPKKSRSLDLKSLYNSKLTEGAPKENLKRKGSGSHGGGDEKGSKRKKVRKEVALSSLDNADGGGKQVADEEDLGEPELGVSEGFHSISGLNGVLVGVASDVCIPKRKRTLVGRKKSDDGQSSNPVGHPRQEIGSDDLGPKVGSDDSGRAVQSSKVNLKKRFDEFKENRNSDSNSISAQHLKQNGDHAPDSVVNSGRSSSKKSKKRDRKHKVLASDKPRVSKEAEPLINSCTISVELHEDDEENLEENAARMLSSRFDPSCTGFSSSSRSSPLPSANGLSFLLSSSRNIVNHGSKSRSGSESASVDTAGRHLRPRKQYNDKEKKSRKRRHFYEILPGHVDAYWALNRRIKVFWPLDQSWYYGLVNDYDEAQRLHHIKYDDRDEEWINLQTERFKLLLLRNEVPGRAKGGRASTKSRRSDQQNGSKSRKEKQRGEEIKEDDSCGGSSMDSEPIISWLARSSHRLKSSSFHGIKKQKTSVTHPSTTSSLLYDEPVSAQGNGTKSSSRGVANNLSCGSLAQDKLGDNLREKSALQSTTQIKDRKQPTVYFRKRFRRPAPMSPPVPKEKHIIVSTPCSISGDHVVGGIQSVKEPSGRRFEGPLWFNYNEGILKMIWDMESASFKFDLHFPIKLILNEAFQSENLWLLNAVLLLRYGTVVTKWPRVCLEMLFVDNVAGLRFLLFEGCLKMAATLLFFVLRVFHQPAPLGNNDLHLQLPFTSIGFKLSSLHAIKQPLVFAIYNFSRLKNSNWVYLDSKLKRHCILSKQLHLSECTYDNIQALQHGSSKFTAASISEPSSVKVVRKRSRPGINIMGVSKVSTQVDTHQSSDAGERKLPPFALSFAAAPSFFLCLHLKLLMEQSTAHLDLCNHVPEDGQEDAALGTGGYSSIDDCSNPNSEIILRKDTTLSNDAAGDGLSCVALDQLTGPSTCGDRVVSQNDQNTGLLGTGTSISHGSERFGNIHSPELQSHHSAQKPGSLPSSSLIHKDKADNGSPFNGDLRVQIPSVDEFEKPNAQQSPVLSWNMNGSVIPSSNRTAPRSSYRRNNSLSLGFQSPAWSDSKTDSLYNDFSNGPKKPRTQVSYSVPFAGYELSSRHKSHNQKGLPKTRIRKASEKKSSDVARVPEKDFECLSCDANVLITVGDKGWREYGSHVVLELFEQNEWKLSVKISGVTRYSYKAHQFMQLGSTNRFTHAMMWKGGKDWILEFPDRSQWALFKEMHEECYNRNLRAASVKNIPIPGVHLIEENDDDVSEATFVRGTMYFRQLKTDFEMALDSSRVLYDMDSEDEQWFSNIRSSENYNGDLNGITEELFEKTMDLFEKAAFAKLRDQFTPNEIEELALHVGPLCIVKIIYDHWHQRRQKKGMALIRHFQPPMWERYQQQLKEWEVAVTKNNLSSNGSLDKGATLEKPSMFAFCLKPRGLEVQNKGLKHRSQKKISVSGHTNRFRYHDGFHTTGRRPNGLAFTDERFVYPGHSYDSLDDSPLPLTSPRVFSPQDAASMKYYSMSNDAYYRNHMQKLHRSKSKKHGSFMYNNGSQPSGSNSQRMPVSEKRNGVRMINHDLPGHRQYAPDCPQKHGVEQLDGSDCVPQQLDEEFRLREAQNASLRVRNTAKFKRHRANNLHSMAEVAIHRAMVALMTADAIKASNEVVGGGSKTNS* 1661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0176 1660 Coils Coil 246 266 - -
Mtr1g0176 1660 MobiDBLite consensus disorder prediction 118 236 - -
Mtr1g0176 1660 MobiDBLite consensus disorder prediction 431 455 - -
Mtr1g0176 1660 MobiDBLite consensus disorder prediction 34 66 - -
Mtr1g0176 1660 MobiDBLite consensus disorder prediction 947 1006 - -
Mtr1g0176 1660 PANTHER PHD FINGER PROTEINS 4 1651 - -
Mtr1g0176 1660 MobiDBLite consensus disorder prediction 1531 1552 - -
Mtr1g0176 1660 MobiDBLite consensus disorder prediction 1097 1122 - -
Mtr1g0176 1660 Pfam Enhancer of polycomb-like 1234 1325 IPR019542 -
Mtr1g0176 1660 MobiDBLite consensus disorder prediction 1 97 - -
Mtr1g0176 1660 MobiDBLite consensus disorder prediction 947 993 - -
Mtr1g0176 1660 MobiDBLite consensus disorder prediction 1525 1552 - -
Mtr1g0176 1660 MobiDBLite consensus disorder prediction 167 181 - -
Mtr1g0176 1660 PANTHER OS01G0179500 PROTEIN 4 1651 - -
Mtr1g0176 1660 Gene3D - 352 402 - -
Mtr1g0176 1660 MobiDBLite consensus disorder prediction 303 338 - -
Mtr1g0176 1660 MobiDBLite consensus disorder prediction 182 209 - -
Mtr1g0176 1660 MobiDBLite consensus disorder prediction 1021 1050 - -
Mtr1g0176 1660 MobiDBLite consensus disorder prediction 415 458 - -
Mtr1g0176 1660 MobiDBLite consensus disorder prediction 478 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0176 Mtr-Chr1 1937153 1943973 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0176 - - gmx:100789801 1947.94