Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0160 ATGGCAACGATTTCTAAGATATCGTCACTGTTATTCTCTTCATCCAAACCTAAACTCATTCACCACATCCTCTCTCCTTCTTCTAATCTCAGAACCCTCACCACTGCTTCTTCCAGAATCACAAAGACCAAGAAAACAGAAGCAGCACTTGCCAAGGAAAAGAGAAGAACGCGTTCTGACAAAGAACTCGACCAGGAGACAATTATTGAGCTTTACAACAATAACTCTCATCTTCATGTTCCTGTTATGCTTTCTCAAGTCTTAGATGTTTTCTCAAATTGTTCCTTAACTTCTTTTGTTGATTGTACTCTTGGTGCTGCTGGTCACTCTACAAATGTGATTAGAGGTCATCCGGAGTTGAAGTATTTTGTTGGGATGGATGTGGACCCTGTGGGGCGTGACACGGCTCAATCCCGCATCAGTTCAGTTTTGGACGATAGGGAGTCTAGTGTGAAAGTGTTTACTGTGTTAAGGAATTTTAGGCACATCAAATCTGTGCTTAGAGGAACGGGCGAGGAGCACTTAGGGGCTGCGTCTATTGATGGCATCTTGATGGACCTGGGCATGTCATCTATGCAGGTGGATGATCCTCAAAGAGGGTTCAGTGTGCTTGGTGATGGACCCCTTGATATGCGCATGGATCCTCAGGCAAGCCTTAAAGCAGAAGACATATTAAATTCTTGGCCAGATACTGAAGTGGGCCGTATCCTAAGGGATTATGGGGAAGAGAGTAATTGGCGTACTCTGCAGAAGAAAATTGTCCTAGCCCGTTTAGAAGGTGGATTACATTCCACTACCGACTTGCTGGATCTCATTCAGCGTGTGACTCCTGGAATGAAAGGGGGGAGACAAGGTTGGATAAAAACAGCAACCCGGGTATTTCAAGCATTGAGAATCGCTGTCAATGATGAACTGAAGACTCTTGAGGATTCTCTCTATTCTTGTTTTGACTGTCTTGCACCTGGTGGAAGGCTTGCTGTCATATCCTTTCACAGTTTGGAGGACAGAATTGTGAAGCAGACATTTCTTAATATAATTAAAGGAAATGAAGACATGGGAGAAGGGGAGAGTTGCAATAGTGATCTTAGGAAGATGATTGATGAAATCAAAGAAAAAGAAGCTTGGATAAGACAAGTAATGCCTGGATCAAATGGAATTATTCTCACAAAAAGACCAATCACGCCATCAGAAGATGAAGAGAACTTGAACCGCAGAAGTAGAAGTGCAAAGCTCAGGGTTATTCAAAAGCTTTGA 1254 0.4306 MATISKISSLLFSSSKPKLIHHILSPSSNLRTLTTASSRITKTKKTEAALAKEKRRTRSDKELDQETIIELYNNNSHLHVPVMLSQVLDVFSNCSLTSFVDCTLGAAGHSTNVIRGHPELKYFVGMDVDPVGRDTAQSRISSVLDDRESSVKVFTVLRNFRHIKSVLRGTGEEHLGAASIDGILMDLGMSSMQVDDPQRGFSVLGDGPLDMRMDPQASLKAEDILNSWPDTEVGRILRDYGEESNWRTLQKKIVLARLEGGLHSTTDLLDLIQRVTPGMKGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYSCFDCLAPGGRLAVISFHSLEDRIVKQTFLNIIKGNEDMGEGESCNSDLRKMIDEIKEKEAWIRQVMPGSNGIILTKRPITPSEDEENLNRRSRSAKLRVIQKL* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0160 417 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 79 417 IPR029063 -
Mtr1g0160 417 Gene3D Putative methyltransferase TM0872, insert domain 197 304 IPR023397 GO:0008168
Mtr1g0160 417 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 79 417 IPR002903 GO:0008168
Mtr1g0160 417 Pfam MraW methylase family 78 416 IPR002903 GO:0008168
Mtr1g0160 417 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 54 417 IPR002903 GO:0008168
Mtr1g0160 417 Gene3D Vaccinia Virus protein VP39 79 414 IPR029063 -
Mtr1g0160 417 TIGRFAM TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 75 416 IPR002903 GO:0008168
Mtr1g0160 417 SUPERFAMILY Putative methyltransferase TM0872, insert domain 199 302 IPR023397 GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0160 K03438 - gmx:100803819 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0160 1 1773754 1777586 Mtr1g0160 1 1773754 1777586 ECH