Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0154 ATGGGCAGTGCATTTCAGCTTAGTGCCGGTTTAAATTTAACCGGTACCAATCTTGTTCACATTCAAGCGAGTTCCAATTCCAAGTTTGCACCTCAATCAGTGAGAGCACTTCCTATACGTATATTATCCGTGGGAAAAAAGCGATCACCTGGACTACAACTCATGGTTGACGAGTATATTGAAAAGATCAAATACTATTGCAGTGTTGAGGATGTTCAAATTCGGTCAAATCCTAGAAATGCACGTGACCATAGGGCTCAGGTTGATGACGAAGACATGGCAGTGATGAATCTTATAAGGTCTGATGATTGGGTTGTGATGTTGGATGAGCGCGGGCAGGATTTACGATCTGAGCAAATGGCAGAGTTGGTGGCTGATGCAGGAAATACTGGTGCTTCACGTATATCTTTCTGTATCGGTGGACCCTATGGTCATGGAAGAAAAATAAGAGAACGTGCTAACTTATCAATCAAGTTATCTTCAATGGTCTTAAATCATCAAATAGCATTACTTGTGCTTGTAGAACAGCTTTACAGGTCATGGACAATTTTAAGGGGACAAAAGTACCACCATTAG 576 0.4149 MGSAFQLSAGLNLTGTNLVHIQASSNSKFAPQSVRALPIRILSVGKKRSPGLQLMVDEYIEKIKYYCSVEDVQIRSNPRNARDHRAQVDDEDMAVMNLIRSDDWVVMLDERGQDLRSEQMAELVADAGNTGASRISFCIGGPYGHGRKIRERANLSIKLSSMVLNHQIALLVLVEQLYRSWTILRGQKYHH* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0154 191 CDD RlmH-like 39 191 IPR003742 GO:0006364|GO:0008168
Mtr1g0154 191 Hamap Ribosomal RNA large subunit methyltransferase H [rlmH]. 37 191 IPR003742 GO:0006364|GO:0008168
Mtr1g0154 191 PANTHER METHYLTRANSFERASE 14 191 IPR003742 GO:0006364|GO:0008168
Mtr1g0154 191 SFLD SPOUT Methyltransferase 27 191 - -
Mtr1g0154 191 SUPERFAMILY alpha/beta knot 38 189 IPR029028 -
Mtr1g0154 191 Pfam Predicted SPOUT methyltransferase 39 190 IPR003742 GO:0006364|GO:0008168
Mtr1g0154 191 PIRSF MT_bac 37 191 IPR003742 GO:0006364|GO:0008168
Mtr1g0154 191 Gene3D - 36 191 IPR029026 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0154 K00783 - gmx:100796609 293.893