Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0147 ATGGGTTTCAAAAGCTTGTCTTTTCTTTGCTTGGCTCTCTTCCTTACAGTTTCTTCTTCCATTCATGCATTTGACATCCAAAAATTGCTAGATAGAACCCCTGAGTTTTCCACCTTCAACAAATACCTCAACGAAACCAAGCTTGTTGGCCAAATCAACCGTCGTAATACCATCACCGTCTTCGCCCTTGATAACGGCGCCATGTCTTCTGTATCCGACAAAATGCCAGAAGCTATCAGGGCTATCATGGCCACCCACGTGCTCCTCGACTATTACGATCCAACAAAGCTCATTGGAGCTATGCATAAGCGCGAACCCTTGACCACCCTTTACCAATCCTCAGGCATCGCCGTGGACCAACAAGGGTACCTTAAGGTTAATCGCACTAGTGACGGTGATTTGGCCATTGGATCTGCTGTGAGTGGTGCTCCAATCGACGTTAAGCTAGTGAAAGTTGTTTTCGCCCAGCCCTACAACATCACCATAATCCAAGTCGCGAAACCTATCATGTTCCCTGGACTTGAAACACAAACCTTGGGTGCACCATCTAATGGAAGCGCTCCAGCAGCCGAAACGAATGTAGATGTTTCTTCGGTTTTTAAAGCACCGCCGGCAAAGGCAAAGAATGCAAGCGCTCCTTCGGCTGCTGAAGAGCCCATCACAGAAGTTTCAGATTCTCCTTCACCTTCTGATGAGCCCAGCGAATCTCCCGTTGAAGCCCCTGCAAAAAGCCCATCTTTGGCTCCTGGTCCAGGTGGTGATGAGGCTGCTGCCGATGCTGCACCTACTAGCAGCTCTTCAAGGATTGTTGTAGGTTTTGTTGGAGCTGTGATGTGCTTCTCTTCTCTCTTGGTCGTTATGTAA 864 0.4838 MGFKSLSFLCLALFLTVSSSIHAFDIQKLLDRTPEFSTFNKYLNETKLVGQINRRNTITVFALDNGAMSSVSDKMPEAIRAIMATHVLLDYYDPTKLIGAMHKREPLTTLYQSSGIAVDQQGYLKVNRTSDGDLAIGSAVSGAPIDVKLVKVVFAQPYNITIIQVAKPIMFPGLETQTLGAPSNGSAPAAETNVDVSSVFKAPPAKAKNASAPSAAEEPITEVSDSPSPSDEPSESPVEAPAKSPSLAPGPGGDEAAADAAPTSSSSRIVVGFVGAVMCFSSLLVVM* 288
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0147 287 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 1 265 - -
Mtr1g0147 287 ProSiteProfiles FAS1/BIgH3 domain profile. 23 154 IPR000782 -
Mtr1g0147 287 Gene3D FAS1 domain 17 165 IPR036378 -
Mtr1g0147 287 SUPERFAMILY FAS1 domain 30 172 IPR036378 -
Mtr1g0147 287 Pfam Fasciclin domain 34 121 IPR000782 -
Mtr1g0147 287 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 265 IPR033254 -
Mtr1g0147 287 MobiDBLite consensus disorder prediction 207 264 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr1g0147 Mtr-Chr1 1663566 1664547 Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0147 - - mtr:MTR_1g009910 483.411