LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr1g0130	ATGGCAACAAAAACTAAAGAAAGTAGTACACTTGTTGGGAATGAGAGGAAGAAGACAGCACCTTCTATCACAACCACCAAAAGGACCACAAAACCATCCACAACAAACAAGAGTAACTCAACCACCTCATCAGAGAAAAACATCCCAAACTATCTAAAACCTACAACAAGTTTCAAACAACTCAAAACTGAGACTCCAATTAAGCCTTCTCCATTAAGAAGAAGATCATTAGACAAATCACTTTCATCTTCAAATTTAACAGCAACAAAACAAAAAGAAACCTCTTTTTCAAGACTTCACAAAACCCTTGTTTCTCCTGGCCCTAGAGAAAGATCTGCTACACTAAATAATAGATCTTCCAATGTTCCAGTTAAAAGTACCAACACTTCAAAACCTATTTCAAATAAGACACCAAGTGATGCAAAAACTAAGCTAGTTGGGAAAAAGGTTATAAATAAGAGTGCTTTTAGTAGAAACAATTCTACTTCTAAAACCTCTAAGAAGGTAGCTAATGATCATGCTTCTGATATTCCTGCAAAGATCAAAGCTGTGATTACATATTCTGATTCATCAAGTGTTGAAACTGAAGATGTTAAAGAGGTTACAAACCAAGAAGTTGAAGTGATAAAAGTGGAGAATGAAGAATATGTATGTCATGAGATTTCAACTGATGTCAACTCTGAATTACCACAACAGCATGAACATGATCAAATTCTTGAGGATTCTGACATGTCTCAGAATCAAGCTGATGATGAGAAAGTCATTTCTACGGTTTCAGACCAAGAAGTAGAAGAAAAGGAGTCACAAGAAGAGGAACATGAACTTGAGCATGAAGAGAAAGAAAACAATAATGAGAATCAGACAGAAGAAGTTGATCATTCGGAGGTTGAAAGCGAAGTTTCTGTAATTGAAAAGGAAGAAAATGAAAGTGAGAATCAGATAGAAGAAGTTGATCGTTCCGAGGTTGAAAGTGAAGTTTCTGTGATTGAAAAGGAAGAAAATCAAAGTGAGAATCAGACAGAAGATGTTGATCGTTCCAAGGTTGAAATCGAAGTTTCTGGTAATGAAAAGGTAGAAATTGAAAGTGGGAATCAGAGAGAAGAAGTTGATCATTTTGAGGTTGAAAGCGAAGTTGCTGTGAATGAAAAGGAAGAAAATGAAAGTGGGAAAGTAATAGAAGATCAAAAAAGTGAGAACAACAATGAAGAGGAACATGGAGGTGAAGAGAAGGAAGCTGTTGAAGGAGGGGTTAGTGAAGAAGTTGAAGAAGCTAAGATTGAGGTAGCACAACCAAAGCAACAACAATTAGCAGTAAAAGGGAAGAATGATTTATCTCAAGTATCTAATGGTATGATTGAGGAAACTGCAAGCAAGCTATTGGGGAGGAAGAACAAGGTTCTTGCATTGGCTGGAGCATTTCAAACTGTCATTGATCATCAAATCAAATGA	1449	0.3616	MATKTKESSTLVGNERKKTAPSITTTKRTTKPSTTNKSNSTTSSEKNIPNYLKPTTSFKQLKTETPIKPSPLRRRSLDKSLSSSNLTATKQKETSFSRLHKTLVSPGPRERSATLNNRSSNVPVKSTNTSKPISNKTPSDAKTKLVGKKVINKSAFSRNNSTSKTSKKVANDHASDIPAKIKAVITYSDSSSVETEDVKEVTNQEVEVIKVENEEYVCHEISTDVNSELPQQHEHDQILEDSDMSQNQADDEKVISTVSDQEVEEKESQEEEHELEHEEKENNNENQTEEVDHSEVESEVSVIEKEENESENQIEEVDRSEVESEVSVIEKEENQSENQTEDVDRSKVEIEVSGNEKVEIESGNQREEVDHFEVESEVAVNEKEENESGKVIEDQKSENNNEEEHGGEEKEAVEGGVSEEVEEAKIEVAQPKQQQLAVKGKNDLSQVSNGMIEETASKLLGRKNKVLALAGAFQTVIDHQIK*	483

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr1g0130	482	Pfam	Plant calmodulin-binding domain	365	477	IPR012417	GO:0005516
	Mtr1g0130	482	MobiDBLite	consensus disorder prediction	221	419	-	-
	Mtr1g0130	482	PANTHER	EMB\|CAB62594.1	1	480	-	-
	Mtr1g0130	482	MobiDBLite	consensus disorder prediction	1	64	-	-
	Mtr1g0130	482	MobiDBLite	consensus disorder prediction	273	308	-	-
	Mtr1g0130	482	PANTHER	CALMODULIN-BINDING PROTEIN-LIKE PROTEIN	1	480	-	-
	Mtr1g0130	482	Coils	Coil	258	349	-	-
	Mtr1g0130	482	MobiDBLite	consensus disorder prediction	76	101	-	-
	Mtr1g0130	482	MobiDBLite	consensus disorder prediction	315	419	-	-
	Mtr1g0130	482	MobiDBLite	consensus disorder prediction	1	146	-	-
	Mtr1g0130	482	MobiDBLite	consensus disorder prediction	109	141	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr1g0130	Mtr-Chr1	1452933	1456661	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr1g0130	-		-	mtr:MTR_1g009660	713.761