Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0113 ATGAGAATTGATCAAGAAAGTGGTGCTGTTTCATCTTCTAGAAAACATCTTGTTTTTGCTTATTACATTACTGGTCATGGTTTTGGACATGCCACTCGTGTCACTGAGGTGGCAAGGCATTTGATCGATGCAGGACATGATGTGCATTTGGTAACTGGTGCTCCTGATTTTGTTTTCACATCTGAAATTAAGTCTCCTAGATTATTCATTCGCAAGGTGCTTTTGGACTGTGGAGCTGTTCAGGCAGATGCTTTGACCGTTGATCGCCTTGCTTCATTGGAGAAGTATTCTGAAACAGCAGTGAAGCCCCGAGCTCAAATCTTGACATCAGAAACCGAATGGCTGAACTCAATCAAAGCAGACTTAGTGGTCTCCGATGTTGTTCCGGTTGCGTGTCGTGCGGCAGCAGATGCTGGCATTCGCTCTGTCTGTGTGACAAATTTCAGTTGGGACTTCATCTATGCAGAGTATGTCATGGCTGCTGGACTTCATCATCGTTCAATAGTTTGGCAGATAGCTGAGGACTATTCCCATTGCGAGTTCCTTATTCGCCTCCCGGGATATTGCCCAATGCCTGCTTTTCGCGATGTTATTGATGTCCCTTTGGTGGTGAGGAGGCTACACAAATCTGCAAAAGAGGTAAGGAAGGAACTTAACGTACCAGATGGTGTAAAGCTTGTTATTCTCAACTTTGGTGGTCAGCCCTCAGGATGGAAGATAAAAGAAGATTTCTTACCTCCTGGTTGGTTGTGCCTGGTTTGTGGTGCTTCCGACAACGCGGACCTTCCGCCAAATTTTAGAAAACTTGCCAAAGACGCATATACGCCCGACATTATTGCAGCATGTGACTGTATGCTTGGAAAAATTGGATATGGTACCGTTAGTGAAGCCTTGGCATACAAGTGTCCCTTTGTCTTTGTACGCAGAGATTATTTCAATGAAGAACCTTTTTTGAGAAATATGCTTGAGTATTCTCAATGTGGTGTCGAAATGATCAGGAGAGATTTAATCACCGGTCACTGGAGACCTTATCTTGAACGTGCGATAAGTTTGAAACCCTGCTATGATACAGGCATCAATGGTGGTGAGGTGGCAGCTCACATCCTTCAGGAGACAGCTTTTGGAAAAAATTATGCATCGGATAAGCTTAGTGGAGCGAGAAGATTGCGTGATGCAATAGTTCTTGGTTATCAACTCCAAAGGGCCCCTGGCCGAGATATTGCTATCCCAGAATGGTACGCTTCCGCCGAAGACCAACAACCTGGTTCACCTGTGAATTCTGGAGGCTATGCATTTCATTCGGGCATTGAAGATTTTGACATTCTTCATGGAGATGTTCAAGGTCTTCCAGATACTGTGGCATTCTTACAGAGCTTATCCGAGTTGGTTGTGAAGCATACAAAGAGAGAGCGCAAGGCTGCAGCTAATCTCTTCAATTGGGAGGAAGAAATTTTTGTTACGAGAGCTCCTGGAAGGTTAGATGTAATGGGCGGCATTGCTGATTATTCTGGTAGTCTTGTCCTGCAGATGCCAATTAGAGAAGCTTGTCATGTTGCTTTGCAAAGAGTCCATCCGAGTAAACATAGACTGTGGAAACATGCCGAGGCCAGACAGAATGACAAAGGAGGGCCTCACACTGCTGTCTTGCAAATTGTATCATACGGCTCAGAATTAGGCAATCGTGCCCCGACTTTTGACATGGATTTGTCTGATTTTATGGATGGAGGCAAGCCAATCTCATATGAGAAAGCAAGAAAATACTTTGCTCAAGATCCAGCCCAAAAGTGGGCAGCATATGTTGCTGGGGCAATTTTGGTCTTAATGACCGAATTGGATGTGAAATTTGAGGATAGTATCAGCATGCTTGTATCATCTGCGGTCCCAGAAGGGAAAGGTGTATCATCTTCTGCATCTGTCGAGGTCGCTAGTATGTCTGCTATTGCAGCTTCTCACGGATTGAATATCGGCTCAAGGGATCTGGCTTTGCTATGCCAGAAGGTGGAAAATCACATTGTAGGAGCTCCATGTGGTGTTATGGACCAGATGGCTTCAGCATGTGGTGAAGCCAACAAACTTCTTGCTATGATTTGCCAGCCTGCAGAGATCGTTGGCCTCGTTGAAATTCCCAACCATATCCGGGTTTGGGGAATTGATTCCGGAATAAGACACAGTGTTGGAGGTGCAGATTATGGCTCTGTCCGAATTGGGACCTTTATGGGTATGAAGATGATAAAGTCAAAGGCTTCCACGGAATTGACTGAGATGAGTGCTGCAAATGGATTGAACTCCGATGAAGTAGAACAAGATGACATAGAACTACTTAAACAAGAAACCTCCTTAGATTACTTATGCAATTTAACACCTCACAGATTTATGGCTCTTTACGCTAAGACACTTCCTGAAACCATTGATGGTGATAAATTTTTGAAGGAATATAAAGATCATAATGATCCTGTCACTGTTATTGATGAGAAGCGTACTTACGTAGTGAGAGCTCCCACATTACATCCTATCAATGAAAATTTCCGAGTCAAGACCTTCAAATCACTTCTGACATCGGCAAGTTCGACTGATCAACTTAACTCTTTAGGAGAATTGCTATATCAGTGCCACTACAGCTACAGTGCCTGTGGACTTGGCTCTGATGGAACAGATAGGCTTGTACACTTAGTACAAGAATTGCAGCATAGTGCAGCATCTAAAGCCGAAGGCGGTACATTATGCGGAGCCAAGATCACTGGTGGAGGTTCAGGTGGAACGGTTTGTGTAATCGGTCGAAATTGTCTCAAGAGCAGTGAACAAATTTTTCAGGTTCAGCAGAGGTACAAAAAAGCTACTGGTTACATGCCGTTTCTTTTTGAGGGCTCGTCACCTGGTGCAGGGAAGTTCGGCCACCTGAAAATTCGCCGGCGAGCTACCCCAAAAAAAATTGACAGCGTTGGGGATGTTAATGCAGTCTTGGCAGAGAAGAAAAGCTGA 2979 0.4448 MRIDQESGAVSSSRKHLVFAYYITGHGFGHATRVTEVARHLIDAGHDVHLVTGAPDFVFTSEIKSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVKPRAQILTSETEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGLHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSAKEVRKELNVPDGVKLVILNFGGQPSGWKIKEDFLPPGWLCLVCGASDNADLPPNFRKLAKDAYTPDIIAACDCMLGKIGYGTVSEALAYKCPFVFVRRDYFNEEPFLRNMLEYSQCGVEMIRRDLITGHWRPYLERAISLKPCYDTGINGGEVAAHILQETAFGKNYASDKLSGARRLRDAIVLGYQLQRAPGRDIAIPEWYASAEDQQPGSPVNSGGYAFHSGIEDFDILHGDVQGLPDTVAFLQSLSELVVKHTKRERKAAANLFNWEEEIFVTRAPGRLDVMGGIADYSGSLVLQMPIREACHVALQRVHPSKHRLWKHAEARQNDKGGPHTAVLQIVSYGSELGNRAPTFDMDLSDFMDGGKPISYEKARKYFAQDPAQKWAAYVAGAILVLMTELDVKFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAASHGLNIGSRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMICQPAEIVGLVEIPNHIRVWGIDSGIRHSVGGADYGSVRIGTFMGMKMIKSKASTELTEMSAANGLNSDEVEQDDIELLKQETSLDYLCNLTPHRFMALYAKTLPETIDGDKFLKEYKDHNDPVTVIDEKRTYVVRAPTLHPINENFRVKTFKSLLTSASSTDQLNSLGELLYQCHYSYSACGLGSDGTDRLVHLVQELQHSAASKAEGGTLCGAKITGGGSGGTVCVIGRNCLKSSEQIFQVQQRYKKATGYMPFLFEGSSPGAGKFGHLKIRRRATPKKIDSVGDVNAVLAEKKS* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0113 992 Pfam GHMP kinases N terminal domain 622 687 IPR006204 GO:0005524
Mtr1g0113 992 PIRSF Gal_kin_glcsltr 1 974 IPR012369 -
Mtr1g0113 992 Gene3D - 813 948 IPR036554 -
Mtr1g0113 992 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 23 335 - -
Mtr1g0113 992 Pfam Galactokinase galactose-binding signature 478 521 IPR019539 -
Mtr1g0113 992 PRINTS Mevalonate kinase family signature 489 513 - -
Mtr1g0113 992 PRINTS Mevalonate kinase family signature 625 647 - -
Mtr1g0113 992 PRINTS Mevalonate kinase family signature 668 687 - -
Mtr1g0113 992 PRINTS Mevalonate kinase family signature 909 926 - -
Mtr1g0113 992 Pfam GHMP kinases C terminal 859 943 IPR013750 -
Mtr1g0113 992 SUPERFAMILY GHMP Kinase, C-terminal domain 713 962 IPR036554 -
Mtr1g0113 992 SUPERFAMILY Ribosomal protein S5 domain 2-like 476 701 IPR020568 -
Mtr1g0113 992 Gene3D - 464 714 IPR014721 -
Mtr1g0113 992 PANTHER MEVALONATE KINASE/GALACTOKINASE 17 969 - -
Mtr1g0113 992 Gene3D Glycogen Phosphorylase B; 22 180 - -
Mtr1g0113 992 PANTHER L-ARABINOKINASE 17 969 - -
Mtr1g0113 992 Gene3D Glycogen Phosphorylase B; 207 350 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0113 K12446 - gmx:100787860 1717.98