Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0097 ATGTCCTCTCCTTCCCCTCGCAATCGCCTCAATCAGTTTTATACTACTAAGAAAAGGAAAGCGATTTCTCCGGCTCCGAAGGCGGGGAGAATAGAGAAAGTTGCAAGGATTGTGGCTGATGGATCTCCAAGTGCGAAAGGATCATTGGAAGGTTACTTGGTTCCATCGCAGGAGGATCCGGTGAGGCCGGATTTGGTTAGAAGGAAATTGGGATTAGACATTGGTGGTTCTCTTGATAAGCAGCCTGTTTCATTAGCTCAAGAGATTCGGCATTTGGATGCTATGAGGGCGGGGATTGAAAATGAAGTGACCATGGTTGATGATTCTGTGAAGGAACACACTTTAAGTGATCTTGGAGATGTTGGTGAAAAATCAGAGCTTAAACAATTTAAAGCTGAGCTTTTTTCACTCTATTGCGGTCAACTGCCACAAGAGACGAGAGTGAAAGGCCACAAGAAGTATGATTCTTTGACATTAGTAGAGGAAAGTAGTAGTATACCGCAGAAGTGCGATGACACTAGTGTGCTGCATTTTGGTTGTGAAAACATTTCGAGCGAGAAGATCACCGTAGACATGAAGTCTGGTGTTGCTGGCAATACTTTGGAAAGTATTCCAGGCTGCTCTGCAAAGGTTTCTGATGGTGGTGCTACTAATGCCTTTGACACGGGTTTTAGAAAATGTAGTAATACTTCTACGTCTATGAATATGGCTGAATGCCAAACACCGGGATCTTTGATTGTTAAAGCATGTATTAGGGGGACTCCAAAGTCAACACGTGGAAGCTCAATGTTTTCGCCTGGAGAGGCCTTTTGGGACGAAGCAATTCAATTAGCTGATGGTTTGGTTGTTCCCACGGGTAATGATGCTTCTAAGGTTATAGAAGAAAGCAATGTGGTGGGAGACCAAGTTGAGATGAAGGGCTCATGTAATTTACAAAATTATGATGGCAAGGCAAGGAAGATATTGGATCAAAGTAAAAACATAGGGTTGGCTGAGATGCACACAAAAGATTCTATGAAAGAAGCATCCAGCCTTCCTGTTAAGCATTTTGATTTTTCAAATGACCATAATATGGATGAAAATATCCTTCAAAATTGTCGTGTTGATAATCAAGTCAATGTTACTTGTGGGTCTGGAAGGAAGTATGAACCTATTTCTGTGGTAAGTCGTACACATGAACAGCCGTATGAAGTGAAGAAGATTTTAGCTGATGAATTAGGCAAAAGAATGAGAAAGGATAATTCCAATATGACATCTAATAATTTTAGTTCACCCAACAACGAGGCCAGGACAACACTCAGTATACATGCATCTTTTGAAGCCACAACTCCTTCAAGTAATGTGTCACTTGATAATCATTTAGACCTACATAGTTGGCTTCAACCTGAAATATGCAGCATATATAGAAAGAAAGGCATTTCAAAGCTTTACAATTGGCAGGTTGACTGCCTTCGTGTGGATGGTGTTCTACAAAGAAGAAATCTTGTGTATTGTGCTTCCACAAGTGCTGGAAAGAGTTTTGTTGCTGAGATTTTAATGTTGCGGAAGGTGATAACAACTGGGAAAATGGCAATACTCGTTCTTCCATATGTATCCATTTGTACAGAAAAGGCAGAACATCTTGAAAAGCTTCTTGAGCCACTTGGTAAACACGTTCGCAGTTATTATGGGAACCAAGGTGGTGGATCACTTCCTAAAGATACTTCTGTAGCTGTATGCACAATAGAGAAGGCAAATTCACTAATCAATAGATTATTGGAAGAGGGCCGTCTCTCAGAAATGGGAATCATTGTGATAGATGAACTGCACATGGTTGGTGATCCAAAAAGAGGTTATCTTCTAGAGCTTATGTTGACAAAGCTTCGCTATGCAGCAGGGGAGGGCATTTCAAAATCTAGTGACGGAGAGGGTTCTGGTGGAAGCAGTGATAAGAATGATCCTGCTCAAGGTCTCCAAATTGTTGGAATGAGTGCGACAATGCCTAACGTGGCAGCAGTTGCTGACTGGCTTCAAGCAGCACTATACCAGACAGAGTTCCGACCAGTTCCTTTAGAAGAATATATTAAAGTTGGCAATTCCATTTATAACAAGAGTATGGAACTTTCTAGGACAATCCCAAAAGGAGCTGACCTTGGTGGCAAGGATCCAGACCACGTTGTTGAACTATGTAACGAGGTTGTTCAAGAGGGACAATCAGTGTTAATATTTTGCTCTAGCCGTAAGGGTTGTGAATCAACTGCAAGACATGTTGCAAAGTTCCTTAAAAGCTTTACTGTTGATATTAATGAGAATAATTGTGAGTTTGCTGATATTACTTCTGCTATTAACTCCCTGAGAAAGTGCCCTGCTGGGTTGGACCCCGTACTTGAAGAAACTTTTCCAGCTGGTGTTGCATTTCACCATGCTGGCCTTACGGTTGAGGAACGAGAGATTGTTGAAACTTGTTATCGAAAAGGCCTTTTACGTGTCTTAACTGCCACATCCACCTTAGCAGCTGGAGTTAATCTACCAGCTAGGAGGGTAATTTTCCGCCAACCTAGAATTGGTTGTGATTTTATTGATGGGACGAGGTACATGCAGATGGCGGGTCGTGCTGGTCGAACTGGAATCGATACAAAAGGAGAAAGTGTACTCATCTGCAAACCACAAGAGTTAAAAAAAGTTATGGGACTTCTGAATGAAAGTTGTCCACCGTTACATTCGTGTTTATCAGAAGATTTAAATGGGATGACTCATGCAATCTTAGAAGTGGTTGCTGGAGGAATAGTTCAAACGGCCAATGACATTCACCGGTATGTAAGATGTACTCTTTTGAACTCCACAAAACCATTTCTGGACGTGGTAAAATCTGCTCAAGAATCTCTAAGATGGTTGTGCCAAAGAAAATTTCTTGAATGGAATGAAGACACTAAACTCTACAGCACCACACCTCTTGGACGTGCATCTTTTGGCAGTTCTCTCTGTCCGGAAGAATCACTTATTGTGTTGGCTGATCTTTCAAGGGCAAGGGAAGGATTTGTCCTTGCATCTGACCTGCATTTGGTTTACTTGGTGACACCAATTAATGTTGATGTTGAGCCAGATTGGGAATCGTACTATGAGCGTTTTGTGAAATTGTCTCCTCTTGATCAGTCGGTTGGAAATCGAGTAGGTGTTACAGAACCGTTTTTGATGCGTATGGCACATGGTGTACCAATGGGTTCAAACAAGTCAAGATGGTCGAACAATAAAAGACAAAATCAACATGGGATGTCCAGTGGAATAGTTAACTCGGATGATCAAACACTTCGTGTCTGTAAACGATTCTATGTTGCTCTCATTTTATCGCTTTTAGTGCAGGAAACTCCTGTGGGTGAGGTTTGTGAAGCATTTAAAGTTGCCAGAGGAATGGTTCAAGGTTTGCAAGAAAATGCTGGTCGGTTTGCATCTATGGTTGCTGTGTTCTGTGAAAGGCTGGGGTGGCATGATTTTGAAGGCTTAGTCGCTAAGTTTCAAAATCGTGTATCATTTGGAGTTAGAGCAGAAGTTGTTGAGCTTACCACCATTCCCTATGTTAAAGGCTCTCGAGCAAGAGCACTCTATAAAGCAGGTTTACGCACACCTCTTGCAATTGCTGAAGCATCCATTCCTGAACTAGTAAAAGCACTTTTTGAATCTTCATCATGGGGTACAGAAGGTTCTGCACAAAGGAGCTTACAATTCGGTGTAGCAAAGAAGATAAAGAATGGTGCTCGCAAGATTGTTTTGGATAAAGCTGAAGAAGCAAGGATTGCTGCTTTCTCAGCCTTTAAGTCACTCGGATATGATGTCCCACAATTCGCTCCGCCCATATCCACTGCTGTATGCAATTCTATCAGGAAAGAAGTTGGAAGTTCCTCCGGAAGTGACACAGCTGACACTAGTCATAGCTTTATTGATACAAATCACATTGATAACTCTAATGTACCTGCTTTAGAAAAAGAAAAGGACTTGATTAAATCATCCGACAATGGTGCTCTAGTTTCTGTAGAAGGAAAATCAGACAGCGTGATGCCACATAGTTTATCTACTGTTCCAGTTGTAGTACCTTCAATAAATGAGCTCAGTATGACTTCTGGTCCTGCCAAAATTCCTGATGTTACCACCCTCTCTGTTCATTTACAGAAACAAAACGATAAGTCCATTATGCATAATGGTTGCCATGCTCAAGGTACAGGGGAACAAGATCATAGGGGGAATTTGGCTAGTGGTAACATGATTAACTCCAGCCGTAAAGGTCCCATTAATGCAGTCAGTAGTCCTGGCGGGCTTGATTCATTTTTGGATTTATGGGATACAGTAGCAGAGTTCTACTTTGACATTCATTACATCAAACGATTGGAATTGCACTCTGCTGCCCCTTTTGAAGTACATGGGATTGCCATCTGTTGGGAAAACTCTCCCATGTACTACATTAATCTTCCCAGGGATATTCTGTTGTCTGGAAATAGAAAAGACGACGGTTTTTCTTTGACTGCATGCAGTTCTAAGCAGAAAGTTTCATCATCTAATTCTAAGCAAGATTTGATGAATGCCATGCACAGATGGAGCAGGATTAGCAAAATAATAGAGAAAAAGGAAGTGAGAAAGTTCACCTGGAATTTGAAGGTTCAGATTCAGGTGCTAAAAAAACCATCAGTTTCCGTTCAGAGGTTTGGTTCGTTGGACACAATTGATAAAAATATGCACCTTGAAGTTGTAGACAATTCCTACATATTATTGCCCCCAATCCATGTTAAAGATGCAATTGATATGTGCATTGTGGCTTGGATTCTGTGGCCTGATGAAGAGAGTAGCTCTAGTCCAAACCTAGATAAGGAGGTAAAGAAAAGGTTATCCCCTGAGGATGCAGCAGCAGCTAATCAGTGTGGCCGGTGGAGGAATCAGATGCGAAAAGCTGCTCATAATGGTTGCTGCCGTCGAGTTGCTCAAACACGAGCATTATGTTCTGTTCTTTGGAAATTGCTTGTTTCTGAGAAACTTGTAGAAGCGCTTATGGAAATAGAAATCCCATTGGTGAATGTTCTTGCTGACATGGAGCTTTGGGGAATTGGTGTTGATTTGGAGGGATGTATCCAGGCTCGAAAATTGTTGGTGAAAAGGCTGAAGCAACTTGAAAAGGAAGCTTACAAACTGGCTGGAATGACGTTTTCATTGAGTATGCCAGCAGATATTGCAAAGGTGCTGTTTGAACACTTGAAGCTGCCCATACCTGATGGGAAAAATAAGGGAAAAAACCATCCAAGTACCGGCAAACACTGTTTGGATGCACTGAGGAATGAACATCCCATTGTTCCAATCATCAAAGAGCACCGAACATTGGCAAAGCTCTTGAACTCTACACTAGGATCAATTTGTTCTCTGGCTAGGCTATCTGTAAGCACACAGAAGTACACATTGCATGGTCATTGGCTCCAGACTTCCACAGCAACTGGACGACTTTCAATGGAGGAACCTAATCTTCAGTGTGTTGAGCATGCAGTTGACTTCAAAATGAATGGTGACAAAAATGAAGGCGATGCTGATGAGAGTTGCAGAGTCAATGCCCGTGACTACTTTGTTCCTACTCAGGATAATTGGTTACTGTTAACAGCAGATTATTCTCAGATAGAATTGAGGTTGATGGCACATTTTTCTAAAGATTCTACACTTATTGAACTTCTTCGTAAGCCTGATGGAGATGTCTTCACAATGATAGCAGCAAGATGGATTGGATGTCCTGAGGTTTCTGTGGGTTCTCGGCAGAGAGAGCAGACCAAAAAGATGGTGTACGGAATTCTTTACGGTATGGGTCCAAATAGTCTTGCAGAACAAATGGATTGCACTTCCGATGAAGCTTCTGAAAGGATTAGTAACTTCAAAAGTACTTTTCCTGGTGTTGCTTCTTGGCTTCATGAAGCTGTTGCATTTTGTAGGAGTAAAGGATATGTAGAGACTCTCAAGGGAAGGAAACGATTTTTGTCAAAAATAAAATTTGGCAGTAGTACAGAAAAATCAAAAGCTCAGAGGCAAGCTGTCAATTCCATTTGTCAGGGATCTGCTGCCGACATAATTAAAATTGCAATGATTAAAATTTACTCTGAAATTTTTCCTGGAGTTGATAAGCTGGATTCGAGTTCTTCAGTCACAGCCAAGTTCGAAATGCTTAGAGATCGTTGCCGGATTTTGTTACAGGTACACGATGAATTAGTGCTGGAAGTTGATCCCTCTGTGGTGAAAGAAGCTGCACTACTGTTGCAGACCAGCATGGAGAATGCAGTCTCACTTCTTGTTCCTCTTAATGTCAAATTAAAGGTTGGAAGAACATGGGGATCTTTGGAGCCATTTGCACCTGATAAATTCACAGGCGACACTCCCATAGCTGATTCCTGA 6390 0.4166 MSSPSPRNRLNQFYTTKKRKAISPAPKAGRIEKVARIVADGSPSAKGSLEGYLVPSQEDPVRPDLVRRKLGLDIGGSLDKQPVSLAQEIRHLDAMRAGIENEVTMVDDSVKEHTLSDLGDVGEKSELKQFKAELFSLYCGQLPQETRVKGHKKYDSLTLVEESSSIPQKCDDTSVLHFGCENISSEKITVDMKSGVAGNTLESIPGCSAKVSDGGATNAFDTGFRKCSNTSTSMNMAECQTPGSLIVKACIRGTPKSTRGSSMFSPGEAFWDEAIQLADGLVVPTGNDASKVIEESNVVGDQVEMKGSCNLQNYDGKARKILDQSKNIGLAEMHTKDSMKEASSLPVKHFDFSNDHNMDENILQNCRVDNQVNVTCGSGRKYEPISVVSRTHEQPYEVKKILADELGKRMRKDNSNMTSNNFSSPNNEARTTLSIHASFEATTPSSNVSLDNHLDLHSWLQPEICSIYRKKGISKLYNWQVDCLRVDGVLQRRNLVYCASTSAGKSFVAEILMLRKVITTGKMAILVLPYVSICTEKAEHLEKLLEPLGKHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLINRLLEEGRLSEMGIIVIDELHMVGDPKRGYLLELMLTKLRYAAGEGISKSSDGEGSGGSSDKNDPAQGLQIVGMSATMPNVAAVADWLQAALYQTEFRPVPLEEYIKVGNSIYNKSMELSRTIPKGADLGGKDPDHVVELCNEVVQEGQSVLIFCSSRKGCESTARHVAKFLKSFTVDINENNCEFADITSAINSLRKCPAGLDPVLEETFPAGVAFHHAGLTVEEREIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGCDFIDGTRYMQMAGRAGRTGIDTKGESVLICKPQELKKVMGLLNESCPPLHSCLSEDLNGMTHAILEVVAGGIVQTANDIHRYVRCTLLNSTKPFLDVVKSAQESLRWLCQRKFLEWNEDTKLYSTTPLGRASFGSSLCPEESLIVLADLSRAREGFVLASDLHLVYLVTPINVDVEPDWESYYERFVKLSPLDQSVGNRVGVTEPFLMRMAHGVPMGSNKSRWSNNKRQNQHGMSSGIVNSDDQTLRVCKRFYVALILSLLVQETPVGEVCEAFKVARGMVQGLQENAGRFASMVAVFCERLGWHDFEGLVAKFQNRVSFGVRAEVVELTTIPYVKGSRARALYKAGLRTPLAIAEASIPELVKALFESSSWGTEGSAQRSLQFGVAKKIKNGARKIVLDKAEEARIAAFSAFKSLGYDVPQFAPPISTAVCNSIRKEVGSSSGSDTADTSHSFIDTNHIDNSNVPALEKEKDLIKSSDNGALVSVEGKSDSVMPHSLSTVPVVVPSINELSMTSGPAKIPDVTTLSVHLQKQNDKSIMHNGCHAQGTGEQDHRGNLASGNMINSSRKGPINAVSSPGGLDSFLDLWDTVAEFYFDIHYIKRLELHSAAPFEVHGIAICWENSPMYYINLPRDILLSGNRKDDGFSLTACSSKQKVSSSNSKQDLMNAMHRWSRISKIIEKKEVRKFTWNLKVQIQVLKKPSVSVQRFGSLDTIDKNMHLEVVDNSYILLPPIHVKDAIDMCIVAWILWPDEESSSSPNLDKEVKKRLSPEDAAAANQCGRWRNQMRKAAHNGCCRRVAQTRALCSVLWKLLVSEKLVEALMEIEIPLVNVLADMELWGIGVDLEGCIQARKLLVKRLKQLEKEAYKLAGMTFSLSMPADIAKVLFEHLKLPIPDGKNKGKNHPSTGKHCLDALRNEHPIVPIIKEHRTLAKLLNSTLGSICSLARLSVSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHAVDFKMNGDKNEGDADESCRVNARDYFVPTQDNWLLLTADYSQIELRLMAHFSKDSTLIELLRKPDGDVFTMIAARWIGCPEVSVGSRQREQTKKMVYGILYGMGPNSLAEQMDCTSDEASERISNFKSTFPGVASWLHEAVAFCRSKGYVETLKGRKRFLSKIKFGSSTEKSKAQRQAVNSICQGSAADIIKIAMIKIYSEIFPGVDKLDSSSSVTAKFEMLRDRCRILLQVHDELVLEVDPSVVKEAALLLQTSMENAVSLLVPLNVKLKVGRTWGSLEPFAPDKFTGDTPIADS* 2130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0097 2129 SMART polaultra3 1855 2077 IPR001098 GO:0003677|GO:0003887|GO:0006260
Mtr1g0097 2129 Pfam DEAD/DEAH box helicase 489 662 IPR011545 GO:0003676|GO:0005524
Mtr1g0097 2129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 489 883 IPR027417 -
Mtr1g0097 2129 SMART ultradead3 472 691 IPR014001 -
Mtr1g0097 2129 MobiDBLite consensus disorder prediction 1 18 - -
Mtr1g0097 2129 Pfam Helix-turn-helix domain 874 965 IPR046931 -
Mtr1g0097 2129 CDD DEXHc_POLQ-like 460 681 - -
Mtr1g0097 2129 MobiDBLite consensus disorder prediction 1067 1088 - -
Mtr1g0097 2129 MobiDBLite consensus disorder prediction 1 26 - -
Mtr1g0097 2129 MobiDBLite consensus disorder prediction 630 649 - -
Mtr1g0097 2129 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 718 918 IPR001650 -
Mtr1g0097 2129 CDD SF2_C_Ski2 680 881 - -
Mtr1g0097 2129 Pfam DNA polymerase family A 1698 2110 IPR001098 GO:0003677|GO:0003887|GO:0006260
Mtr1g0097 2129 Gene3D Taq DNA Polymerase; Chain T, domain 4 1689 1798 - -
Mtr1g0097 2129 Gene3D - 1876 2020 - -
Mtr1g0097 2129 SUPERFAMILY DNA/RNA polymerases 1667 2112 IPR043502 -
Mtr1g0097 2129 MobiDBLite consensus disorder prediction 1068 1088 - -
Mtr1g0097 2129 CDD DNA_pol_A_theta 1689 2112 - -
Mtr1g0097 2129 Gene3D - 1422 1686 IPR036397 GO:0003676
Mtr1g0097 2129 SUPERFAMILY Sec63 N-terminal domain-like 1090 1216 - -
Mtr1g0097 2129 Coils Coil 1694 1714 - -
Mtr1g0097 2129 PANTHER DNA POLYMERASE THETA 476 2117 - -
Mtr1g0097 2129 Gene3D - 1060 1195 - -
Mtr1g0097 2129 Pfam Helicase conserved C-terminal domain 718 869 IPR001650 -
Mtr1g0097 2129 Gene3D - 1815 2109 - -
Mtr1g0097 2129 MobiDBLite consensus disorder prediction 634 648 - -
Mtr1g0097 2129 PRINTS DNA-polymerase family A (pol I) signature 1806 1828 IPR002298 GO:0003887|GO:0006261
Mtr1g0097 2129 PRINTS DNA-polymerase family A (pol I) signature 1922 1947 IPR002298 GO:0003887|GO:0006261
Mtr1g0097 2129 PRINTS DNA-polymerase family A (pol I) signature 1959 1970 IPR002298 GO:0003887|GO:0006261
Mtr1g0097 2129 PRINTS DNA-polymerase family A (pol I) signature 1981 1992 IPR002298 GO:0003887|GO:0006261
Mtr1g0097 2129 PRINTS DNA-polymerase family A (pol I) signature 2060 2073 IPR002298 GO:0003887|GO:0006261
Mtr1g0097 2129 SMART helicmild6 787 869 IPR001650 -
Mtr1g0097 2129 Gene3D - 690 890 IPR027417 -
Mtr1g0097 2129 PANTHER DNA POLYMERASE I 476 2117 IPR002298 GO:0003887|GO:0006261
Mtr1g0097 2129 Gene3D - 458 681 IPR027417 -
Mtr1g0097 2129 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 486 678 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0097 Mtr-Chr1 1012192 1027631 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0097 K02349 - gmx:100813857 3213.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0097 1 1012192 1027631 Mtr1g0097 1 1012192 1027631 ECH