Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0074 ATGGCGATCATCTCCGATTACCAAGACGATAACCAAACCAAAACTTCATCATCATCATCTTCCCAACCAAAACCTTCAAAACCTATTCCCTTCTCTTCCACCTTTGATCCTTCAAACCCAACCACTTTTCTTGAAAAGGTATTCGACTTCATCGCTAAGGAAAGCACCAATTTCTTCGATAAGGATTCCGCCGAGAAGGTGGTTTTGTCTGCTGTTCGCGCTGCTAGGGTTAAGAAAGCTAAGTCTGTTGCTGCGGAGAAGGCTAAGATTGCTGCTAAGGAGAAAGCAAAGGCTGCTGCTGAGAAAAAATTGAACGATGAGAAGTCCGAGGCGGTGACCGAGAAGATTGATGAGAAGGCTGCACCAAATCAGGGTAATGGTATGGATTTGGAGAAGTATTCCTGGACTCAAACTTTGCAAGAGCTGAATGTGAATGTTCCAGTGCCAAATGGAACAAAATCAGGGTTTGTCATCTGTGAGATTAAGAAGAACCATCTAAAAGTTGGACTCAAAGGGCAGCCACCAATTATTGATAGGGAGCTATATAAATCTATCAAGCCTGATGAATGTTATTGGAGCATAGAGGATCAGAATACAGTTTCTATTCTTTTAACCAAGCATGATCAAATGGACTGGTGGAAATGTCTTGTTAAGGGTGATCCTGAAATTAACACCCAAAAAGTTGAACCTGCAAGCAGCAAACTTGGTGACCTGGATTCTGAGACTCGAATGACCGTTGAAAAGATGATGTTTGATCAGAGGCAAAAGTCTATGGGCCTTCCTACAAGCGAGGAGCTTCAGAAAGAGGAAATGATGAAGAAATTTATGAGCCAGCATCCTAACATGGACTTCTCGGGTGCAAAGTTTTAG 870 0.4253 MAIISDYQDDNQTKTSSSSSSQPKPSKPIPFSSTFDPSNPTTFLEKVFDFIAKESTNFFDKDSAEKVVLSAVRAARVKKAKSVAAEKAKIAAKEKAKAAAEKKLNDEKSEAVTEKIDEKAAPNQGNGMDLEKYSWTQTLQELNVNVPVPNGTKSGFVICEIKKNHLKVGLKGQPPIIDRELYKSIKPDECYWSIEDQNTVSILLTKHDQMDWWKCLVKGDPEINTQKVEPASSKLGDLDSETRMTVEKMMFDQRQKSMGLPTSEELQKEEMMKKFMSQHPNMDFSGAKF* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0074 289 PANTHER NUCLEAR MOVEMENT PROTEIN NUDC 19 289 IPR037898 -
Mtr1g0074 289 Gene3D - 124 251 IPR008978 -
Mtr1g0074 289 MobiDBLite consensus disorder prediction 1 37 - -
Mtr1g0074 289 Pfam CS domain 132 206 IPR007052 -
Mtr1g0074 289 ProSiteProfiles CS domain profile. 128 217 IPR007052 -
Mtr1g0074 289 CDD p23_NUDC_like 133 217 - -
Mtr1g0074 289 PANTHER NUCLEAR MIGRATION PROTEIN NUDC 19 289 - -
Mtr1g0074 289 Coils Coil 83 110 - -
Mtr1g0074 289 SUPERFAMILY HSP20-like chaperones 120 230 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0074 Mtr-Chr1 805423 808245 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0074 K25866 - pop:7464548 343.969