Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0061 ATGCCGTATTGCGACGTTGGAACACAAACATCTTCCCCAGCCACCTCCTCATCCGCCGTCGCACCCGCCGATGCTCATCTCAACAATGACGTCAAAATCTTCTACAGAACCTACGGTCGCGGTCCTACCAAAGTCCTTCTCATCATCGGATTGGCTTCGACGCATGAAGGATGGGGTCCACAAATAAAGGGATTTACTGGAACAAACGTACCTAATGATGAAGACGACGCCGTTTGGAGTTGTGAAGGTGATAATGAGGCCGGCGGTGGTATTCAGGTTTGCGCTTTTGATAATCGGGGCGTTGGTCGGAGCTCCGTGCCCATTAGAAAGTCCGATTACTCAACGAAGATTATGGCAAAGGATGCAATTACTTTGTTGGATCATTTAGGTTGGAAAAAGGCACATGTTTTTGGGCATTCCATGGGATCTATGATAGCTTGTAAATTAGCAGCAATGGTTCCTGATAGAGTTCTCTCCATGGCATTGCTCAATGCAACAGGTGGTGGTTTTCAATGTTTTCCAAAGTTTGACCGACGAACAATCTCCGTTGCTTACCGATTCTTGAAGGCAAAGAGTCCTGAGCAAAGAGCTGAAGTTGACTTGGACACCCACTATTCACAAGAATATCTTGAGGAATATGTTGGAACCGTGAAAAGGAGAACGATATTGTATCAGCAATATGTTAAAGGTATATCAAGTAGTGGAATGCAATCTAACTATGGCTTTGACGGTCAACTCAGTGCATGTTGGAACCATAAAATGACTCAAAAAGAGATAGAAGCAATCAAATCTGCAGGTTTTCTTGTTTCAGTCATTCATGGCAGGGCTGATATAATTGCTCAGCTATATTATGCAAGAAGACTTGCGGAGAGGTTTCATCCAATGGCTCGGCTGGTAGAGCTTCACGGAGGTCATTTAGTGAGTCATGAGCGGCCTGAAGAGGTTAATCAAGCACTGTTTGACTTGATCAAGGCCTCAGAAGTGAAGATGATCCCACATGATTGGACTAACTTGCCAAATACACAGTCTTGGTGGAAAGAGAGAAGGATGTTATTAGTCAAAAACAATCAGAGTGGAAACAACATCTCCACTGAGTACATAATAGAAAAACTGCATTTCTGCATACTATACTTCCTTAGCCTCCTTATTTTGGTATTTGAATTTGGAAGAAAGCTTGTAAGGAGCTTAAAGCCAGTTCGAGTTGGAAGTTCCACTGCATACATTGACAGTCAATAA 1236 0.4337 MPYCDVGTQTSSPATSSSAVAPADAHLNNDVKIFYRTYGRGPTKVLLIIGLASTHEGWGPQIKGFTGTNVPNDEDDAVWSCEGDNEAGGGIQVCAFDNRGVGRSSVPIRKSDYSTKIMAKDAITLLDHLGWKKAHVFGHSMGSMIACKLAAMVPDRVLSMALLNATGGGFQCFPKFDRRTISVAYRFLKAKSPEQRAEVDLDTHYSQEYLEEYVGTVKRRTILYQQYVKGISSSGMQSNYGFDGQLSACWNHKMTQKEIEAIKSAGFLVSVIHGRADIIAQLYYARRLAERFHPMARLVELHGGHLVSHERPEEVNQALFDLIKASEVKMIPHDWTNLPNTQSWWKERRMLLVKNNQSGNNISTEYIIEKLHFCILYFLSLLILVFEFGRKLVRSLKPVRVGSSTAYIDSQ* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0061 411 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 403 - -
Mtr1g0061 411 PRINTS Epoxide hydrolase signature 90 105 IPR000639 GO:0003824
Mtr1g0061 411 PRINTS Epoxide hydrolase signature 136 149 IPR000639 GO:0003824
Mtr1g0061 411 PRINTS Epoxide hydrolase signature 150 163 IPR000639 GO:0003824
Mtr1g0061 411 PRINTS Epoxide hydrolase signature 300 322 IPR000639 GO:0003824
Mtr1g0061 411 MobiDBLite consensus disorder prediction 1 21 - -
Mtr1g0061 411 Pfam alpha/beta hydrolase fold 90 189 IPR000073 -
Mtr1g0061 411 Gene3D alpha/beta hydrolase 23 324 IPR029058 -
Mtr1g0061 411 SUPERFAMILY alpha/beta-Hydrolases 29 321 IPR029058 -
Mtr1g0061 411 Coils Coil 408 411 - -
Mtr1g0061 411 PANTHER EPOXIDE HYDROLASE 3 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0061 Mtr-Chr1 631221 636545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0061 79 157 Acyl Lipid Metabolism Gene Families AT3G51000 40.000 5.76e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0061 - - gmx:100785963 640.958