Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0026 ATGGAGATGAATGAGGTGCAAAATGAAAGGAAGAAGGAGGTGGATATAGCAGTAGTTGCAAATGACGGTGCTCTTTTAGATGATGATGGCAAACCCAAACGAACAGGGACATTATGGACCGCAGCCGCGCATATCATAACGGCAGTGATTGGTGCTGGTGTGCTGACATTGCCATGGGTGATGGCTCAAATGGGATGGATCCTTGGTATATCATATATAATAATCGTAGGTACTGTCACACTCTACACATCCAATCTTCTAGCAGATTGTTACAGAACACCAGACCCTGTCACTGGCAAGAGGAATACTTACATGGAAGCTGTTAAAACCATCTTAGGTGGTAAAATGCATTTGATATGCGGAATTGTCCAATATGCTTTGCTTAGTGGAGCTGCAATTGGATACACAATTACAACATCTGTAGGCGTGGTGTCAATACAAAAAATTAATTGCTTCCACAAAAAGGGAATTGAAGCTCCATGCCAATTTTCTAATAATCCCTATATGATTGGTTTGGGAATTATTGAAATCTTCTTGTCTCAAATCCCCAATTTTCACAAGTTATCATGGCTCTCAATCATAGCAGCAGCAACATCTTTTGGTTATGCATTTATTGGTATTGGACTTTCTCTTGCTACCGTCATCCAAGGGAAGGGAAAGAGTACCTCTTTAATTGGAGGAAACAGTGAGCAAAGTTCAGAAGACAAAGTGTGGAATATACTCATTGCATTGGGAAACACTGCACTTGCTAGCAGCTATTCTCAAATTGCTATAGATATTCAGGATTCATTAAAGTCATCACCACCAGAAAATAAAGTGATGAAGATGGCAAACAAAGTAGGATTATCAGCAATGACAATTATCTTCCTCTTATGTGCCTGTTCTGGCTATGCTGCATTTGGTTCCAACACTCCAGGAAGCATCCTTATGGGGTCTGGCTTTAAAGAGCCTTTTTGGCTTGTTGATTTAGCCAATGTCTTCCTTGTTGTGCATTTGGTTGGAGCATATCAGGTCATTGTCCAACCTATTTTCGGCGTGGTTGAATCGTTGGTTGGTCAAAGGTGGCCGAAATCAAGTTTTATAAGCCGAGAATACTCAATAGGCATTTGCAACTTGAACTTATTTAGGCTAATTTGGAGAACCATATTTGTCACAATAGTGACTATTCTGGCTATGGCAATGCCCTTTTTCAATGAAATGCTTGCACTTCTTGGAGCTATGGGGTATTGGCCATTAACAATATTTTTTCCAATTCAAATGTTTATAACCAAACAAAAGATTAGGAGACTAAGTATCAAATGGCTTGGACTCCAAACTTTGAACTTTATTTTTATGGTAATATCAATAGCTACAGCAACTGCAGCCATTCATGGGTTCAGTGAAGCATTTCATAAATACAAGCCATTTAAGTATAAAATGTAG 1422 0.3924 MEMNEVQNERKKEVDIAVVANDGALLDDDGKPKRTGTLWTAAAHIITAVIGAGVLTLPWVMAQMGWILGISYIIIVGTVTLYTSNLLADCYRTPDPVTGKRNTYMEAVKTILGGKMHLICGIVQYALLSGAAIGYTITTSVGVVSIQKINCFHKKGIEAPCQFSNNPYMIGLGIIEIFLSQIPNFHKLSWLSIIAAATSFGYAFIGIGLSLATVIQGKGKSTSLIGGNSEQSSEDKVWNILIALGNTALASSYSQIAIDIQDSLKSSPPENKVMKMANKVGLSAMTIIFLLCACSGYAAFGSNTPGSILMGSGFKEPFWLVDLANVFLVVHLVGAYQVIVQPIFGVVESLVGQRWPKSSFISREYSIGICNLNLFRLIWRTIFVTIVTILAMAMPFFNEMLALLGAMGYWPLTIFFPIQMFITKQKIRRLSIKWLGLQTLNFIFMVISIATATAAIHGFSEAFHKYKPFKYKM* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0026 473 Pfam Transmembrane amino acid transporter protein 34 456 IPR013057 -
Mtr1g0026 473 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 17 465 - -
Mtr1g0026 473 PANTHER OS05G0424000 PROTEIN-RELATED 17 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0026 Mtr-Chr1 291829 294837 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0026 17 470 Organic Solute Cotransporters AT1G10010 51.078 2.12e-176 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0026 K24917 - gmx:100804643 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0026 1 291829 294837 Mtr1g0026 1 291829 294837 ECH