Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0020 ATGAGTATTACACAAACTCTAATCATGGAACATGAACAAGATGATGATGGCAAAGCCAAAAGAACTGGGAACGTGTGGACGGCAACAACACACATCATAACAGTGGTAGTTGGGGCAGGGGTGTTGGCTCTAGCATGGGCTATGGCTCAACTAGGATGGATAGCTGGTATAGCCAGTATACTAACCTTTGCATCCATCTCTATTTTCACTTACAGTCTTGTAGCTGATTGCTATAGGTTTCCAGACCCAATCACTGGTAAAAGAAATTATACTTACATGCAAGCTGTCAAGAGCTACTTAGGTGGAACGATGCAAGTAATTTGTGGATTGATTTTGTATGGAAAGCTAGCTGGGATAACAGTGGGCTACACAATAACTTCATCGACAAGCTTAGCAGAAATAAACAAAGTTGTTTGCGTCCATAGAAAAGGACTTGAAGCTGATTGCAGCACTTCTTATAATCCCTATATGATCGGTTTTGGGATATTGCAGATTTTCTTGTCTCAAATTCCCAACTTTCACAAACTGACATGGATATCAACCATTGCCGCTATCACCTCGTTTGGTTATGTATTCATTGCAGTTGGCCTTTGTCTTACTGTCCTTATCTCGGGAAAAGGGGCATCTACTAGCATAACCGGAACACAAATAGGGCCAGAACTAACTGCTGCAGAGAAAGTGTGGCGTGTTTGCACTTCAATGGGAAACATAGCTCTTGCTAGCACTTATGCTACTGTTATTTACGACATAATGGATACATTAAAGTCACATCCAGCAGAAAATAAACAAATGAAAAGGGCTAACGTGATAGGGGTATCAACAATGACAATGATATTCCTACTATGTAGTTGCCTTGGCTATGCTGCTTTTGGTGACCACACACCAGGAAACATTTTTTTTGGATTTTATGAGCCCTATTGGATAGTTGCCATTGGAGAAGTATGCATCGTAATCCACATGATTGGAGCATATCAGGTCATGGCACAACCATTTTTTCGCGTCGTTGAAATGGGTGCTAATATCGCATGGCCCGATTCAAAATTCATAAACCAAGACTATTCATTTAACGTGTGCGGTGCAACAATCAAGTTGAACTTGTTTAGGTTAATTTGGAGGACGATATTTGTGATACTAGCAACCATTCTTGCCATGGCAATGCCATTTTTCAATCAATTTCTAGCTCTGTTGGGAGCGATTGGATTTGGGCCATTAGTTGTCTTCTTTCCTATACAAATGCACATTGCTCAGAAGCGCATACCCGTGTTATCGTTGAGGTGGTGTGCGCTCCAACTTTTGAATTGTCTTTGTATGGTTGTCTCATTGGCTGCTATAGTTGCTTCAATTCATGAAATTAGCGAAAATATTCACAAATACAAGATTTTTGCTTATAAACAATAG 1398 0.4034 MSITQTLIMEHEQDDDGKAKRTGNVWTATTHIITVVVGAGVLALAWAMAQLGWIAGIASILTFASISIFTYSLVADCYRFPDPITGKRNYTYMQAVKSYLGGTMQVICGLILYGKLAGITVGYTITSSTSLAEINKVVCVHRKGLEADCSTSYNPYMIGFGILQIFLSQIPNFHKLTWISTIAAITSFGYVFIAVGLCLTVLISGKGASTSITGTQIGPELTAAEKVWRVCTSMGNIALASTYATVIYDIMDTLKSHPAENKQMKRANVIGVSTMTMIFLLCSCLGYAAFGDHTPGNIFFGFYEPYWIVAIGEVCIVIHMIGAYQVMAQPFFRVVEMGANIAWPDSKFINQDYSFNVCGATIKLNLFRLIWRTIFVILATILAMAMPFFNQFLALLGAIGFGPLVVFFPIQMHIAQKRIPVLSLRWCALQLLNCLCMVVSLAAIVASIHEISENIHKYKIFAYKQ* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0020 465 Pfam Transmembrane amino acid transporter protein 22 448 IPR013057 -
Mtr1g0020 465 PANTHER OS05G0424000 PROTEIN-RELATED 10 459 - -
Mtr1g0020 465 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 10 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0020 Mtr-Chr1 256834 260646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0020 14 461 Organic Solute Cotransporters AT1G10010 53.215 1.73e-178 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0020 K24917 - gmx:100810628 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0020 1 256834 260646 Mtr1g0020 1 256834 260646 ECH