Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0006 ATGGGTGGAGATTTTTTGTCAATGTTTCATCTAGAAACAAAGAGATTAATATGGCTTATTGGAATTACTTTTTCAATAATCTTAGCTTTTCAGTATGTTGAACCAAATTATGGCAATGTTCTTCTCTCTCTATTCTCTGCTGATAGAATACCAACATCATCAGAAAGTACAGATACCAATGTGACAATTTTGAATCATGCAAACTTTACAGATGAACTTTCCATTCAGAAAGCTAATGCAACTATAGATACTGTTTCAATAACTGGTTTTGTCTTGGAACCAATATTGTCACAAAACAAATCTCAAGAAAAAGTAAATTCTTATTCTCCTTCTCCTGAGAATGCTCCAACAAATTTAAGTCCACCTTTTGGTTCTACGACAAATGTTGGTCCGAATATTACAACTGCAGTGTTATCAAATGATGATAACATAACGAATTCCATAAAGAATGAGAGTTTTAGTCCATCGTCGCAAAATGGTGGCAATGTACAAGACAAGAGTTCTTCTATCAGCAGCACTGTGCCTAAGGAGCGTCAAGAAATTCATGTACCGATTAAAGAAGTCACGACAGTGTCTGAAATGAACAAGTTATTGCTTCAAAGCCATGCTTCGTATCGATCAATGAAGCCGAGGTGGTTTTCAAATGTTGATCAAGAGTTACTACAGGCAAGATCAGAGATTGAAAATGCACCAATTGTAAAGAATGATCCAAATCTTTATGGTCCAATTTATCATAATGTTTCCATGTTCAAGAGGAGCTATGAATTAATGGAAGAGAGACTCAAAGTGTATGTATACAGAGAAGGAGCTAGACCTATACTGCATTCGCCGTTTCTCACTGGAATCTATGCTTCTGAAGGGTGGTTTATGAAGCTAATGGAAGCTAATAAACGATTTGTTACCAAAAATCCAAAGAAGGCTCATCTGTTTTACTTGCCATTCAGTTCTAGGATGCTAGAGGAAGCCTTGTATGTGAAGAATTCACATAGCCATAAGAACCTGATTCAATATCTACATGATTATGTAGACATGATTGCGGCGAGACATTCTTTCTGGAACAGAACTGGAGGTGCTGATCATTTTCTAGTTGGTTGTCATGATTGGGCTCCATCGGAAACAAAATTACGCTTGGCGAACTGCATAAGGTCCCTCTGCAACGCCGATGTAAAAGAAGGATTTGTCTTCGGCAAAGACGCGTCTCTTCCTGAAACATACGTCCGAAACGCTCAAATTCCAACAAGGGATCTTGGTGGCAATTCATTTTCAAAGAAGACAACATTAGCCTTTTTCGCAGGGAGCATGCATGGTTATGTAAGGCCAATACTATTGAAACATTGGGAAAACAAAGATCCTGACATGAAAATCTTTGGAAAATTGCCAAATTCTAAAGGAAACAGTAACTACATTCATTACATGAAGAGTAGCAAGTACTGTATTTGTGCAAAAGGGTATGAAGTGAATAGTCCAAGAGTCGTGGAAGCAATTTTCTATGAATGTGTTCCGGTTATTATATCGGATAATTTTGTGCCACCCTTTTTCGAGGTTTTGGATTGGGAATCCTTTTCTGTCATTGTTTTGGAGAAGGATATTCCAAATTTGAAAAATATACTACTTTCTATTCCGGAAAAGCGGTATCTAAGCATGCTAATGAGGGTAAAAAAGGTACAGAAGCATTTCCTTTGGAACAAGAATCCTGTCAAGTATGATATATTTCATATGATCCTTCACTCTATTTGGTACAATAGAGTCTTCTCTGCCACTAGTTAG 1767 0.3718 MGGDFLSMFHLETKRLIWLIGITFSIILAFQYVEPNYGNVLLSLFSADRIPTSSESTDTNVTILNHANFTDELSIQKANATIDTVSITGFVLEPILSQNKSQEKVNSYSPSPENAPTNLSPPFGSTTNVGPNITTAVLSNDDNITNSIKNESFSPSSQNGGNVQDKSSSISSTVPKERQEIHVPIKEVTTVSEMNKLLLQSHASYRSMKPRWFSNVDQELLQARSEIENAPIVKNDPNLYGPIYHNVSMFKRSYELMEERLKVYVYREGARPILHSPFLTGIYASEGWFMKLMEANKRFVTKNPKKAHLFYLPFSSRMLEEALYVKNSHSHKNLIQYLHDYVDMIAARHSFWNRTGGADHFLVGCHDWAPSETKLRLANCIRSLCNADVKEGFVFGKDASLPETYVRNAQIPTRDLGGNSFSKKTTLAFFAGSMHGYVRPILLKHWENKDPDMKIFGKLPNSKGNSNYIHYMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLDWESFSVIVLEKDIPNLKNILLSIPEKRYLSMLMRVKKVQKHFLWNKNPVKYDIFHMILHSIWYNRVFSATS* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0006 588 MobiDBLite consensus disorder prediction 102 121 - -
Mtr1g0006 588 Pfam Exostosin family 258 538 IPR040911 -
Mtr1g0006 588 MobiDBLite consensus disorder prediction 146 176 - -
Mtr1g0006 588 PANTHER EXOSTOSIN FAMILY PROTEIN 138 586 - -
Mtr1g0006 588 MobiDBLite consensus disorder prediction 146 178 - -
Mtr1g0006 588 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 138 586 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0006 Mtr-Chr1 87301 91024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0006 - - gmx:100526957 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4084 3 54590755 54593890 Mtr1g0006 1 87301 91024 PCT