Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1322 ATGCTTTCCAACCCATCGAGTTTTATCAATAAATCAACCAAAAAGAGGTATGTTAGGGGTATGCAGCTGCAATTAGAGAGAGAGAGAGAGAGAGAGAGAGTTGGTGAAGTCGTGAAGATAACAAAGCTTCGCTCAGAGAGTTTCAGAAATTGCGAATACTCTAATGAGGGTATGATGTTGTCTAAAATTGAGTCTAACAAGAAGACTGGCGAAAGTTCTAGGGATGGGAAGTTGTTAAAAGAGATTGAAACTATAAGCAAGGCTTTGTATTTGGATAAAAGATTTCCGAGGAATACAGTATCCTCAGCTAATTCTCGATCCAAGTCTGCTGGGAAATCTCACATACCTGATCCTAGATCAAAGCCTGCAGCTAGTAATGAAGATTCTTCACGCAAGGATAAGAAGTCTATATGGAATTGGAAACCGTTAAAGGCATTTTCCCATATCCGCAATAGGAAGTTTGACTGTAGCTTTTCTCTACAAGTCCATTTGATTGAAAAGTTACCTTCAACTTTTAATGGTACTAGCTTTAATGTATACTGGAAGAGGAGGGATGGGGTTTTGGTGACCCGTCCAGCCAAGGTAGTTGAAGGTGTGGCAGAATTTGAAGAGAAATTGACATACACTTGCTCAGTGTATGGCAGTAGGAGTGGGCCTCACCATTCAGCTAAATATGAAGCTAAGCATTTTTTACTCTATGCTTCTGTTCTTGGCTCGCCAGAACTCGATTTGGGGAAGCATAGGGTCGACCTCACGAGGTTGCTTCCTCTTACACTGGAAGAACTCGGGGAGGAGAAGAACTCAGGGAAGTGGACTACAAGTTTTAGATTATCTGGAGTTGCCAGGGGTGCTGTAATGAATGTCAGTTTTGGGTATGAGGTGGCTGGTGATAACAGTAACGCTACCAAGGACACCCATAATGTTCCTAATGCTTTGACTGCAAGGCGAGTTGGAAGTTTGCCGACTTTTTCCAAGCAGTATTCTCCTCGAACTATGGATGAGGTAAAGGATCTTCATGAGGTTTTGCCCACATCAAGGTCAGCACTGGCCAGCTCAATAGACATTCTCTATCAGAAATTTGATGAAGAAAAGGCAAATAGTCCAGTGCATGACAAACCCGAACGGGATTTGTGCTCTGAGAATAATGAGCTAGTCAAATCAAACGAATCTCATTTGATGGATCCTGGGAAAGAACAATCTGAAGAGTCTGTTGGCAATGATGAAAAATGCAGCCCAGTTCCTGGCAATCCTGAAATTAAAGTGTTTCAAGAAAACATGGAGCCAATTCAATCTGATGTTGATGTTAATGGAAACCCTGAAGAGTGCCAAGCTAGACTTTCTGCTGCTGATCAGGGCATAGAATCATCATCAAATGAACCTCTTAGCTTAGAGGCATCCACCACAAAGGCTCCTGATTCTGATGTTGATGCCCTTGATACTGCTGGTAACCAGTTAGACTTTGATGTGGATACCCATGATACTGCTGGTATTCATTTACATTCTGATGTCAATACCCATGATGCTGCTGGTATCCAGTTATCTTCTGAATATGCTATTACATGTGACTCCTTGGGTGAGGAAAATGACGATTCTAAGGAGAAGGTTATGCCAAACAAATTCACTTCTGAAGACGATGACTTTATCACTAAAGAGCTGCTCATGCAAGAATTAGAATCAGCTTTAAACAGTATCTCAGATTTGGAGACAGCTGCACTGGAATCTCCCAAAGAAGAGAAATATAGTGAAACCAGATCTGGATATAAAATGAGAAAATCACACAGCTTGGATGATGTGACAGAATCAGTCGCCAGTGAATTTTTAAGCATGATAGGTGCTGACCACAGCCCATTTGGTTTGAGTTCTGAAAGTGAAGCTGAGTCTCCAAGAGAGCGCCTTTTAAAGCAATTTGAGAAGGAGGCTCTAGCTGAGGGTTTTTCTTTATTTGATTTTGAAATGGGTGATGATGAATCTGAAGGACACTATAATGCGCCTGTTGGATCTGAGCAGTGGAACTTCTCTGAGGGCCCCAGGTCTTCATCACTATTACAAGATCTGCTGCAGGAAGTGCGTCCAGTTGAGTCTCAGAAAGTGAGGAGCAAACAGAGGGCTCAAATGGTAGAAGACTTGGAAACAGAAGCCTTGATGCGTGAGTGGGGTTTGAATGAGGATGCCTTTAAGCATTCTCCACCGAAAGACTCTGCTGGTTTTGGAAGTCCCATTCACTCTTCACCTGAAGAACCTCTTACTTTGCCTCCTCTTGCTGAGGGGTTAGGTCCTTTTCTTCAGACAAAGGATGGGGGATTCTTACGAAGTATGGATCCATTGCTTTTCAGGAACTCTAAGAGTGGTGGAAGCTTGATTATGCAAGTATCCAATCCTGTTGTGGTACCTGCAGAAATGGGTTCTGGTGTAATGGAGATTTTGCAGTGTTTGGCTTCATTGGGAATTGAAAAGCTCTCTATGCAGGCAAACAAGATAATGCCACTGGAGGATATCACAGGGAAGACAATGCAGCAAGTGGCTTGGGAAGCTATGCCTCTCTTGGAGGGAACAGAGAGGCAATGTATGTTACAACATGATCTGGTGGCAGGGCAAGATACTAGTTCTTTGCAAAGTAGCTTGAAAGGAACATCACTGGGACCAAAGATTACTAAGTCTAATACAAGTTCACTAGGCAATCAAACAAGTTCAGAATTTGCTTCATTGGAAGATCTTGCTCCATTGGCTATGGATAAAATTGAAGCACTTTCAATGGAGGGTTTGAGAATACAGTCTGGGATGTCTGATCAGGATGCGCCATCAAACATCATTGCACAATCCATTGGGGATGTTTCAGCTCTCCAGGGCAAGGGGGCTGATATTAGTGGGTCTCTTGGTCTGGACGGAGCCGCAGGTTTACAGTTGTTGGATCTAAAAGATAGCAGCGCCGGTGTTGAATCTGATGATGGTATAATGGGCCTATCACTAACTCTGGATGAATGGATGAGATTGGATTCTGGTGAGATTGATGATATAGAGAATATCAGTGATCATACCACTAAACTTCTTGCAGCCCATCATGCCAACTCTTTTGACTTCATGCGGGGGACCTCTAAAGGAGAGAAGAAAAGAGGCAAAGGTCATGGAAGAAAGTGTGGTTTGTTGGGAAATAATTTTACAGTAGCTTTGATGGTGCAACTGCGTGATCCTCTGCGAGACTATGAGCCTGTTGGGACACCAATGCTTGCTTTGATACAAGTCGAAAGAGTGTTTGTCCCGCCAAAGCCAAGAATGTACTGTAATGTGTCCGAGATAAGGAACAATAACAACGAAGATGATGAACGTGAAACTAGTGCTAAGTCGGAATCCAAGGATGACAAGAAAGAAGAGAAAATCTCTGAAGAGGAAGGCATTCCTCAGTTTAAGATAACTGAAGTCCATGTTGCTGGTCTGTCAACAGAACCGGAACCTCGCAAAAAGAAGCTTTGGGGTACTTCAACGAATGAAAAATCTGGCTCACGTTGGCTTCTTGCTAATGGAATGGGGAAGAGTAATAAGCATCCTATGATGAAGTCAAAAGTTGCATCTAAATCGGGTGCTTTAGCTACAACAAAAGTGCAACCTGGTGACACCTTGTGGAGCATATCATCTCGTGTTTATGGTTCTAGATCAAAATGGAAGGAGTTGGCAGCTGTAAATCCACATATCAGAAACCCCAACGTCGTTATATCAGATAAAACTATTAGATTGAAGTGA 3735 0.4276 MLSNPSSFINKSTKKRYVRGMQLQLERERERERVGEVVKITKLRSESFRNCEYSNEGMMLSKIESNKKTGESSRDGKLLKEIETISKALYLDKRFPRNTVSSANSRSKSAGKSHIPDPRSKPAASNEDSSRKDKKSIWNWKPLKAFSHIRNRKFDCSFSLQVHLIEKLPSTFNGTSFNVYWKRRDGVLVTRPAKVVEGVAEFEEKLTYTCSVYGSRSGPHHSAKYEAKHFLLYASVLGSPELDLGKHRVDLTRLLPLTLEELGEEKNSGKWTTSFRLSGVARGAVMNVSFGYEVAGDNSNATKDTHNVPNALTARRVGSLPTFSKQYSPRTMDEVKDLHEVLPTSRSALASSIDILYQKFDEEKANSPVHDKPERDLCSENNELVKSNESHLMDPGKEQSEESVGNDEKCSPVPGNPEIKVFQENMEPIQSDVDVNGNPEECQARLSAADQGIESSSNEPLSLEASTTKAPDSDVDALDTAGNQLDFDVDTHDTAGIHLHSDVNTHDAAGIQLSSEYAITCDSLGEENDDSKEKVMPNKFTSEDDDFITKELLMQELESALNSISDLETAALESPKEEKYSETRSGYKMRKSHSLDDVTESVASEFLSMIGADHSPFGLSSESEAESPRERLLKQFEKEALAEGFSLFDFEMGDDESEGHYNAPVGSEQWNFSEGPRSSSLLQDLLQEVRPVESQKVRSKQRAQMVEDLETEALMREWGLNEDAFKHSPPKDSAGFGSPIHSSPEEPLTLPPLAEGLGPFLQTKDGGFLRSMDPLLFRNSKSGGSLIMQVSNPVVVPAEMGSGVMEILQCLASLGIEKLSMQANKIMPLEDITGKTMQQVAWEAMPLLEGTERQCMLQHDLVAGQDTSSLQSSLKGTSLGPKITKSNTSSLGNQTSSEFASLEDLAPLAMDKIEALSMEGLRIQSGMSDQDAPSNIIAQSIGDVSALQGKGADISGSLGLDGAAGLQLLDLKDSSAGVESDDGIMGLSLTLDEWMRLDSGEIDDIENISDHTTKLLAAHHANSFDFMRGTSKGEKKRGKGHGRKCGLLGNNFTVALMVQLRDPLRDYEPVGTPMLALIQVERVFVPPKPRMYCNVSEIRNNNNEDDERETSAKSESKDDKKEEKISEEEGIPQFKITEVHVAGLSTEPEPRKKKLWGTSTNEKSGSRWLLANGMGKSNKHPMMKSKVASKSGALATTKVQPGDTLWSISSRVYGSRSKWKELAAVNPHIRNPNVVISDKTIRLK 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1322 1244 SMART LysM_2 1196 1244 IPR018392 -
Mibi13g1322 1244 MobiDBLite consensus disorder prediction 872 895 - -
Mibi13g1322 1244 MobiDBLite consensus disorder prediction 444 473 - -
Mibi13g1322 1244 MobiDBLite consensus disorder prediction 1097 1132 - -
Mibi13g1322 1244 MobiDBLite consensus disorder prediction 449 469 - -
Mibi13g1322 1244 MobiDBLite consensus disorder prediction 1100 1132 - -
Mibi13g1322 1244 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 151 298 IPR019448 -
Mibi13g1322 1244 ProSiteProfiles C2 NT-type domain profile. 146 294 IPR019448 -
Mibi13g1322 1244 MobiDBLite consensus disorder prediction 390 405 - -
Mibi13g1322 1244 ProSiteProfiles LysM domain profile. 1195 1243 IPR018392 -
Mibi13g1322 1244 Pfam LysM domain 1198 1236 IPR018392 -
Mibi13g1322 1244 Gene3D LysM domain 1195 1242 IPR036779 -
Mibi13g1322 1244 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 59 1237 IPR039614 -
Mibi13g1322 1244 Coils Coil 550 570 - -
Mibi13g1322 1244 MobiDBLite consensus disorder prediction 99 131 - -
Mibi13g1322 1244 MobiDBLite consensus disorder prediction 386 418 - -
Mibi13g1322 1244 CDD LysM 1198 1236 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1322 Mibi-ChrMibi13 19177115 19183696 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g1322 13 19177115 19183696 Mibi13g1322 13 19177115 19183696 ECH